Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p03550 Brassica napus
Aa31LG1G24830 Aethionema arabicum
Actinidia23357 Actinidia chinensis
Actinidia30014 Actinidia chinensis
Ah.11g050990 Amaranthus hybridus
AL4G41710 Arabidopsis lyrata
Aqoxy2G03955 Aquilegia oxysepala
AT2G43060 Arabidopsis thaliana
ATR0686G247 Amborella trichopoda
Atru.chr6.3543 Acer truncatum
AUR62028696 Chenopodium quinoa
BcaB06g29284 Brassica carinata
BcaB06g29285 Brassica carinata
BcaC02g07205 Brassica carinata
BcaC02g12418 Brassica carinata
BcaNung03535 Brassica carinata
BNapus_Darmor_BZH_scaffold_64p00090 Brassica napus
BolC4t22051H Brassica oleracea
BolC4t28506H Brassica oleracea
BraA04t18707Z Brassica rapa
BraA05t19341Z Brassica rapa
C04p04120 Brassica napus
C04p70060 Brassica napus
CANSAT01G0934 Cannabis sativa
CANSAT78G0009 Cannabis sativa
CARHR138130 Cardamine hirsuta
Carub.0004s2554 Capsella rubella
Cc01_g16110 Coffea canephora
CDE02G4090 Ceratophyllum demersum
CDE04G3135 Ceratophyllum demersum
CDE07G0882 Ceratophyllum demersum
CDE09G1368 Ceratophyllum demersum
Cfa008551 Carpinus fangiana
Ciclev10016996m.g Citrus clementina
CiPaw.01G108100 Carya illinoinensis
CiPaw.02G059600 Carya illinoinensis
CiPaw.13G055500 Carya illinoinensis
CiPaw.14G044000 Carya illinoinensis
ClCG08G003780 Citrullus lanatus
COL.COLO4_26568 Corchorus olitorius
Cpa.g.sc8.70 Carica papaya
CsaV3_6G003020 Cucumis sativus L.
CSS0012153 Camellia sinensis var. sinensis
CSS0028586 Camellia sinensis var. sinensis
CSS0032639 Camellia sinensis var. sinensis
DCAR_004769 Daucus carota
Dinv10443 Davidia involucrata
Dinv28809 Davidia involucrata
Dinv44235 Davidia involucrata
Duzib133G1390 Durio zibethinus
Duzib138G1875 Durio zibethinus
Duzib211G0461 Durio zibethinus
ECA247G2119 Erigeron canadensis
EL10Ac5g10623 Beta vulgaris
Eucgr.H00442 Eucalyptus grandis
Eucgr.H00724 Eucalyptus grandis
FAN07G0144 Fragaria x ananassa
FAN12G0052 Fragaria x ananassa
FAN12G3367 Fragaria x ananassa
FAN15G0641 Fragaria x ananassa
FAN15G2376 Fragaria x ananassa
FAN22G0040 Fragaria x ananassa
FAN22G0070 Fragaria x ananassa
FAN24G0649 Fragaria x ananassa
FAN24G3081 Fragaria x ananassa
FAN27G1389 Fragaria x ananassa
FAN27G2625 Fragaria x ananassa
FvH4_2g17750 Fragaria vesca
FvH4_2g17760 Fragaria vesca
Gohir.A07G159000 Gossypium hirsutum
Gohir.A07G196700 Gossypium hirsutum
Gohir.A11G142700 Gossypium hirsutum
Gohir.D07G167400 Gossypium hirsutum
Gohir.D07G203100 Gossypium hirsutum
Gohir.D11G149000 Gossypium hirsutum
Gorai.001G228500 Gossypium raimondii
Gorai.007G159800 Gossypium raimondii
Gorai.N002800 Gossypium raimondii
HanXRQChr01g0007251 Helianthus annuus
Haze_11077 Corylus avellana
Hma1.2p1_0412F.1_g147140 Hydrangea macrophylla
Hma1.2p1_0959F.1_g241620 Hydrangea macrophylla
HPP92_023344 Vanilla planifolia
Lj1P101T27 Lonicera japonica
Lj2P1117T13 Lonicera japonica
Lsat_1_v5_gn_5_178301 Lactuca sativa
Manes.11G114000 Manihot esculenta
Manes.12G059000 Manihot esculenta
Manes.13G054600 Manihot esculenta
MBI07_g35368_MAGBIO Magnolia biondii
MD05G1158700 Malus domestica
MD05G1158800 Malus domestica
MD10G1151600 Malus domestica
MD10G1151700 Malus domestica
MELO3C026134.2 Cucumis melo
Migut.D00738 Erythranthe guttata
Migut.N00665 Erythranthe guttata
MSTRG.18497 Avicennia marina
Nitab4.5_0004516g0010 Nicotiana tabacum
Nn1g08305 Nelumbo nucifera
Oeu003658.1 Olea europaea
Oeu013415.1 Olea europaea
Oeu049588.1 Olea europaea
Oeu057829.1 Olea europaea
Os04g0660100 Oryza sativa ssp. japonica
Peaxi162Scf00335g00067 Petunia axillaris
PGR083G0764 Punica granatum
PGR142G0694 Punica granatum
PGSC0003DMG400005560 Solanum tuberosum
Potri.002G232500 Populus trichocarpa
Potri.014G149800 Populus trichocarpa
Prupe.1G178500 Prunus persica
Prupe.8G190000 Prunus persica
Prupe.8G190100 Prunus persica
PSO675G5714 Papaver somniferum
QL09p046680 Quercus lobata
QL10p044103 Quercus lobata
QL93p0263_0042 Quercus lobata
RcHm_v2.0_Chr4g0409781 Rosa chinensis
RcHm_v2.0_Chr6g0282781 Rosa chinensis
RcHm_v2.0_Chr6g0282791 Rosa chinensis
Rhsim13G0052900 Rhododendron simsii
Sabra02G0177300 Salix brachista
Sabra14G0113200 Salix brachista
Sc17g0001650 Simmondsia chinensis
Sed0015684 Sechium edule
SGA_v2.0_scaffold77G25295 Striga asiatica
Solyc12g042010.1 Solanum lycopersicum
Sopen09g012960 Solanum pennellii
Sp4g25190 Schrenkiella parvula
TAR365G0119 Trochodendron aralioides
TAR633G2277 Trochodendron aralioides
TAR636G0814 Trochodendron aralioides
THA.LOC104802290 Tarenaya hassleriana
THA.LOC104803428 Tarenaya hassleriana
Thecc.01G210700 Theobroma cacao
Thhalv10017615m.g Eutrema salsugineum
TWI18G0981 Tripterygium wilfordii
TWI36G1602 Tripterygium wilfordii
TWI63G1319 Tripterygium wilfordii
unitig_0.g414 Utricularia gibba
unitig_52.g17443 Utricularia gibba
vmacro02818 Vaccinium macrocarpon
Zm00001eb067570 Zea mays
Zm00001eb432720 Zea mays

User provided reference genes

Program Settings