Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
AagrBONN_evm.TU.Sc2ySwM_368.3250 Anthoceros agrestis
Actinidia34888 Actinidia chinensis
Ah.03g133380 Amaranthus hybridus
Ah.10g028400 Amaranthus hybridus
Aqoxy4G00327 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.00SNP9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.03NBHP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2DSY3L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.883WGW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K50RJN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QPLA3G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VJ3LFE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZXP4DA Arachis hypogaea
ATMG00516 Arabidopsis thaliana
ATMG00660 Arabidopsis thaliana
ATR0730G072 Amborella trichopoda
Atru.chr1.3624 Acer truncatum
AUR62004733 Chenopodium quinoa
AUR62037526 Chenopodium quinoa
AUR62042343 Chenopodium quinoa
AUR62043906 Chenopodium quinoa
BolSC28t60328H Brassica oleracea
BolSC28t60432H Brassica oleracea
BraSC48t46282Z Brassica rapa
BraSC48t46322Z Brassica rapa
BraSC77t46635Z Brassica rapa
BraSC77t46662Z Brassica rapa
CAN.G1.5 Capsicum annuum
CAN.G110.12 Capsicum annuum
CAN.G1109.4 Capsicum annuum
CAN.G505.4 Capsicum annuum
CAN.G787.10 Capsicum annuum
CAN.G85.24 Capsicum annuum
CANSAT78G1777 Cannabis sativa
CARHR283020 Cardamine hirsuta
Ca_22173_v3 Cicer arietinum L.
Cfa023010 Carpinus fangiana
Ciclev10012798m.g Citrus clementina
Ciclev10017151m.g Citrus clementina
ClCG09G013030 Citrullus lanatus
Cpa.g.sc38.57 Carica papaya
CsaV3_5G017030 Cucumis sativus L.
CsaV3_5G020380 Cucumis sativus L.
DCAR_032434 Daucus carota
Dinv06682 Davidia involucrata
ECA039G0011 Erigeron canadensis
ECA236G2402 Erigeron canadensis
EL10Ac6g14329 Beta vulgaris
EL10Ac6g14456 Beta vulgaris
FAN01G1368 Fragaria x ananassa
FAN17G0417 Fragaria x ananassa
Glyma.12G155200 Glycine max
Gohir.A03G133705 Gossypium hirsutum
Gohir.A10G199900 Gossypium hirsutum
Gohir.A10G200000 Gossypium hirsutum
Gohir.D10G207900 Gossypium hirsutum
Gorai.011G233600 Gossypium raimondii
GSVIVG01004978001 Vitis vinifera
HanXRQChr14g0460771 Helianthus annuus
HanXRQMTg0579401 Helianthus annuus
Hma1.2p1_0038F.1_g024120 Hydrangea macrophylla
Hma1.2p1_0066F.1_g036150 Hydrangea macrophylla
Lalb_Chr02g0153671 Lupinus albus
Lalb_Chr03g0038471 Lupinus albus
Lalb_Chr03g0038991 Lupinus albus
Lalb_Chr17g0337341 Lupinus albus
Lj2P1229T95 Lonicera japonica
Lj6g0026306 Lotus japonicus
LjContig00439g0018526 Lotus japonicus
Lsat_1_v5_gn_0_34981 Lactuca sativa
Lsat_1_v5_gn_2_41741 Lactuca sativa
Lsat_1_v5_gn_5_16200 Lactuca sativa
Lsat_1_v5_gn_5_16401 Lactuca sativa
Lsat_1_v5_gn_6_2961 Lactuca sativa
Lsat_1_v5_gn_7_109460 Lactuca sativa
Manes.16G058078 Manihot esculenta
MBI04_g15069_MAGBIO Magnolia biondii
Medtr6g012880 Medicago truncatula
MELO3C028549.2 Cucumis melo
MELO3C030616.2 Cucumis melo
Migut.B01023 Erythranthe guttata
Migut.B01305 Erythranthe guttata
MSTRG.20585 Avicennia marina
Nitab4.5_0000145g0220 Nicotiana tabacum
Nitab4.5_0000299g0070 Nicotiana tabacum
Nitab4.5_0000345g0130 Nicotiana tabacum
Nitab4.5_0000593g0150 Nicotiana tabacum
Nitab4.5_0001152g0440 Nicotiana tabacum
Nitab4.5_0001761g0130 Nicotiana tabacum
Nitab4.5_0002739g0230 Nicotiana tabacum
Nitab4.5_0003632g0030 Nicotiana tabacum
Nitab4.5_0004300g0100 Nicotiana tabacum
Nitab4.5_0005831g0040 Nicotiana tabacum
Nitab4.5_0006085g0020 Nicotiana tabacum
Nitab4.5_0007225g0020 Nicotiana tabacum
Nitab4.5_0009709g0010 Nicotiana tabacum
Nitab4.5_0010951g0010 Nicotiana tabacum
Nitab4.5_0024895g0010 Nicotiana tabacum
Nitab4.5_0029129g0030 Nicotiana tabacum
Nn1g09976 Nelumbo nucifera
Nn1g09997 Nelumbo nucifera
Nn1g10042 Nelumbo nucifera
Nn1g10098 Nelumbo nucifera
Nn4g26005 Nelumbo nucifera
Oeu002130.1 Olea europaea
Oeu020894.1 Olea europaea
Peaxi162Scf00489g00022 Petunia axillaris
Peaxi162Scf01267g00005 Petunia axillaris
Peaxi162Scf01462g00001 Petunia axillaris
PGR069G0003 Punica granatum
PGSC0003DMG400020779 Solanum tuberosum
PGSC0003DMG400041193 Solanum tuberosum
Phvul.005G088636 Phaseolus vulgaris
Phvul.011G104800 Phaseolus vulgaris
Potri.007G062102 Populus trichocarpa
QL04p020150 Quercus lobata
RcHm_v2.0_Chr2g0148221 Rosa chinensis
RcHm_v2.0_Chr2g0148231 Rosa chinensis
RcHm_v2.0_Chr7g0235961 Rosa chinensis
RcHm_v2.0_MTg0498311 Rosa chinensis
RcHm_v2.0_MTg0499091 Rosa chinensis
SabraMtG0001200 Salix brachista
SalBow1G3053 Salvia bowleyana
SalBow8G1406 Salvia bowleyana
Sc03g0005070 Simmondsia chinensis
Sc17g0003720 Simmondsia chinensis
Sed0004476 Sechium edule
SEGI_01777 Sequoiadendron giganteum
SGA_v2.0_scaffold119G32726 Striga asiatica
SGA_v2.0_scaffold167G38415 Striga asiatica
SGA_v2.0_scaffold400G50899 Striga asiatica
SHI11895 Sapria himalayana
SMO364G0802 Selaginella moellendorffii
Solyc00g025290.1 Solanum lycopersicum
Solyc08g036537.1 Solanum lycopersicum
Sopen11g014320 Solanum pennellii
Thhalv10023031m.g Eutrema salsugineum
TPR.G161 Trifolium pratense
TPR.G22447 Trifolium pratense
TPR.G24723 Trifolium pratense
TPR.G28261 Trifolium pratense
TPR.G32363 Trifolium pratense
unitig_750.g28447 Utricularia gibba
unitig_87.g27938 Utricularia gibba
VMungo0329G0007 Vigna mungo

User provided reference genes

Program Settings