Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p39430 Brassica napus
A05p35100 Brassica napus
Aa31LG8G1550 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2768 Anthoceros agrestis
Actinidia21832 Actinidia chinensis
Actinidia26000 Actinidia chinensis
Actinidia31148 Actinidia chinensis
Ah.08g217360 Amaranthus hybridus
Ah.15g094950 Amaranthus hybridus
AL3G26600 Arabidopsis lyrata
Aqoxy7G04178 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.56RDUW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7PP1M3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F1PVR5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KXG0W2 Arachis hypogaea
AT3G14280 Arabidopsis thaliana
ATR0099G034 Amborella trichopoda
Atru.chr1.4140 Acer truncatum
BcaB04g18835 Brassica carinata
BcaB06g25397 Brassica carinata
BcaC05g29096 Brassica carinata
BcaC09g48397 Brassica carinata
BolC1t04981H Brassica oleracea
BolC5t33987H Brassica oleracea
BraA01t03983Z Brassica rapa
BraA05t22323Z Brassica rapa
C01p50260 Brassica napus
C05p53060 Brassica napus
CANSAT56G3023 Cannabis sativa
CARHR089210 Cardamine hirsuta
Carub.0003s1397 Capsella rubella
Cc04_g00760 Coffea canephora
Cfa003464 Carpinus fangiana
Ciclev10026732m.g Citrus clementina
CiPaw.01G211800 Carya illinoinensis
CiPaw.02G131300 Carya illinoinensis
ClCG07G014310 Citrullus lanatus
ClCG09G001380 Citrullus lanatus
COL.COLO4_30860 Corchorus olitorius
Cpa.g.sc25.187 Carica papaya
CsaV3_3G030990 Cucumis sativus L.
CsaV3_7G033950 Cucumis sativus L.
CSS0037124 Camellia sinensis var. sinensis
DCAR_007659 Daucus carota
Dinv20386 Davidia involucrata
Dinv37821 Davidia involucrata
Duzib160G0856 Durio zibethinus
Duzib235G1369 Durio zibethinus
ECA234G4728 Erigeron canadensis
Eucgr.I02161 Eucalyptus grandis
FAN02G2923 Fragaria x ananassa
FAN05G3446 Fragaria x ananassa
FAN09G2652 Fragaria x ananassa
FAN14G2768 Fragaria x ananassa
FAN14G3672 Fragaria x ananassa
FvH4_6g35780 Fragaria vesca
Glyma.03G263400 Glycine max
Glyma.07G045700 Glycine max
Glyma.16G013600 Glycine max
Glyma.19G262400 Glycine max
Gohir.A06G143500 Gossypium hirsutum
Gohir.A09G075600 Gossypium hirsutum
Gohir.A10G047648 Gossypium hirsutum
Gohir.D06G148800 Gossypium hirsutum
Gohir.D09G075300 Gossypium hirsutum
Gohir.D10G051950 Gossypium hirsutum
Gorai.006G090400 Gossypium raimondii
Gorai.010G173300 Gossypium raimondii
Gorai.011G055500 Gossypium raimondii
GSVIVG01016673001 Vitis vinifera
HanXRQChr09g0277231 Helianthus annuus
HanXRQChr10g0311991 Helianthus annuus
HanXRQChr12g0360121 Helianthus annuus
Haze_16132 Corylus avellana
HPP92_005865 Vanilla planifolia
Hund18641 Selenicereus undatus
Lalb_Chr04g0261221 Lupinus albus
Lalb_Chr10g0101121 Lupinus albus
Lalb_Chr15g0076711 Lupinus albus
Lalb_Chr17g0343251 Lupinus albus
Lj1g0005720 Lotus japonicus
Lj3g0024707 Lotus japonicus
Lsat_1_v5_gn_4_92221 Lactuca sativa
Lsat_1_v5_gn_5_137940 Lactuca sativa
Manes.04G150600 Manihot esculenta
Manes.11G013000 Manihot esculenta
MBI19_g32869_MAGBIO Magnolia biondii
MD09G1173200 Malus domestica
MD17G1154100 Malus domestica
Medtr7g117550 Medicago truncatula
Medtr8g023100 Medicago truncatula
MELO3C022697.2 Cucumis melo
MELO3C024308.2 Cucumis melo
Migut.I01128 Erythranthe guttata
MSTRG.10915 Avicennia marina
MSTRG.4536 Avicennia marina
Nitab4.5_0008337g0080 Nicotiana tabacum
Nitab4.5_0008798g0020 Nicotiana tabacum
Nn6g35724 Nelumbo nucifera
Oeu008400.1 Olea europaea
Oeu015475.1 Olea europaea
Os02g0782900 Oryza sativa ssp. japonica
Os06g0193300 Oryza sativa ssp. japonica
Os10g0390701 Oryza sativa ssp. japonica
Peaxi162Scf00038g02243 Petunia axillaris
PGR119G0182 Punica granatum
PGSC0003DMG400009175 Solanum tuberosum
PGSC0003DMG400028866 Solanum tuberosum
PGSC0003DMG402028848 Solanum tuberosum
Phvul.009G261901 Phaseolus vulgaris
Phvul.010G123400 Phaseolus vulgaris
Potri.001G163100 Populus trichocarpa
Potri.003G072400 Populus trichocarpa
Prupe.3G031300 Prunus persica
Psat4g165560 Pisum sativum
PSO135G0283 Papaver somniferum
QL05p001275 Quercus lobata
RcHm_v2.0_Chr2g0147821 Rosa chinensis
Rhsim08G0244400 Rhododendron simsii
Sabra01G0129600 Salix brachista
Sabra03G0043200 Salix brachista
SalBow6G5493 Salvia bowleyana
SalBow7G2254 Salvia bowleyana
Sed0016877 Sechium edule
Sed0021338 Sechium edule
SGA_v2.0_scaffold71G23919 Striga asiatica
Solyc03g123580.4 Solanum lycopersicum
Solyc12g055700.3 Solanum lycopersicum
Sopen03g041350 Solanum pennellii
Sopen12g024150 Solanum pennellii
Sp3g12570 Schrenkiella parvula
TAR626G1734 Trochodendron aralioides
THA.LOC104810392 Tarenaya hassleriana
THA.LOC104815599 Tarenaya hassleriana
THA.LOC104822615 Tarenaya hassleriana
Thecc.06G129700 Theobroma cacao
Thhalv10021716m.g Eutrema salsugineum
TPR.G18172 Trifolium pratense
TWI14G0574 Tripterygium wilfordii
TWI23G1266 Tripterygium wilfordii
vmacro15084 Vaccinium macrocarpon
VMungo0331G0914 Vigna mungo
VMungo1309G1714 Vigna mungo
Zm00001eb203790 Zea mays
Zm00001eb278460 Zea mays

User provided reference genes

Program Settings