Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p18520 Brassica napus
A07p29920 Brassica napus
Aa31LG4G3470 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1363 Anthoceros agrestis
Actinidia28982 Actinidia chinensis
Ah.13g073540 Amaranthus hybridus
AL2G32950 Arabidopsis lyrata
Aqoxy2G02750 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A4X0ZB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q28JUU Arachis hypogaea
AT1G73180 Arabidopsis thaliana
ATR0733G245 Amborella trichopoda
Atru.BG.83.p Acer truncatum
Atru.chr4.1402 Acer truncatum
AUR62002390 Chenopodium quinoa
AUR62023798 Chenopodium quinoa
BcaC08g45664 Brassica carinata
BolC2t09126H Brassica oleracea
BolC3t18675H Brassica oleracea
BolC6t38540H Brassica oleracea
BraA02t06891Z Brassica rapa
BraA07t30630Z Brassica rapa
BraA07t30631Z Brassica rapa
C02p30710 Brassica napus
C06p34190 Brassica napus
CAN.G1411.3 Capsicum annuum
CAN.G256.23 Capsicum annuum
CANSAT11G2028 Cannabis sativa
CARHR066180 Cardamine hirsuta
Carub.0002s1997 Capsella rubella
Ca_18641_v3 Cicer arietinum L.
Ca_25383_v3 Cicer arietinum L.
CBR_g53754 Chara braunii
Cc03_g14040 Coffea canephora
CDE04G2667 Ceratophyllum demersum
Ciclev10019752m.g Citrus clementina
CiPaw.02G100600 Carya illinoinensis
ClCG07G015220 Citrullus lanatus
COL.COLO4_23329 Corchorus olitorius
COL.COLO4_29146 Corchorus olitorius
COL.COLO4_29149 Corchorus olitorius
Cpa.g.sc9.361 Carica papaya
Cre08.g375900 Chlamydomonas reinhardtii
CsaV3_4G002810 Cucumis sativus L.
CSS0015120 Camellia sinensis var. sinensis
CSS0046337 Camellia sinensis var. sinensis
CSS0050366 Camellia sinensis var. sinensis
DCAR_027526 Daucus carota
DCAR_027527 Daucus carota
Dinv07059 Davidia involucrata
Dinv33201 Davidia involucrata
Dinv33202 Davidia involucrata
Duzib151G0783 Durio zibethinus
ECA232G1195 Erigeron canadensis
EL10Ac3g06083 Beta vulgaris
Eucgr.H00310 Eucalyptus grandis
Eucgr.H00311 Eucalyptus grandis
Eucgr.L01724 Eucalyptus grandis
FAN19G2119 Fragaria x ananassa
FAN23G1744 Fragaria x ananassa
FAN26G1320 Fragaria x ananassa
FAN28G0627 Fragaria x ananassa
FvH4_1g25500 Fragaria vesca
Glyma.02G137200 Glycine max
Glyma.03G132500 Glycine max
Glyma.07G208200 Glycine max
Gohir.A02G009975 Gossypium hirsutum
Gohir.D02G010200 Gossypium hirsutum
Gorai.005G012500 Gossypium raimondii
GSVIVG01038139001 Vitis vinifera
HanXRQChr15g0483441 Helianthus annuus
Haze_01365 Corylus avellana
Hma1.2p1_0150F.1_g066860 Hydrangea macrophylla
Hma1.2p1_0150F.1_g066870 Hydrangea macrophylla
Hma1.2p1_0554F.1_g177930 Hydrangea macrophylla
Hund03196 Selenicereus undatus
Lalb_Chr09g0328121 Lupinus albus
Lalb_Chr16g0384461 Lupinus albus
Lalb_Chr16g0384471 Lupinus albus
Lj1g0021010 Lotus japonicus
Lj3g0007177 Lotus japonicus
Lj4A14T50 Lonicera japonica
Lj4A14T51 Lonicera japonica
Lj6g0012253 Lotus japonicus
Lsat_1_v5_gn_5_150841 Lactuca sativa
Lsat_1_v5_gn_9_61481 Lactuca sativa
Manes.04G036150 Manihot esculenta
Mapoly0011s0080 Marchantia polymorpha
MBI03_g14783_MAGBIO Magnolia biondii
MBI11_g23940_MAGBIO Magnolia biondii
MBI11_g23941_MAGBIO Magnolia biondii
MBI11_g30564_MAGBIO Magnolia biondii
MBI14_g40932_MAGBIO Magnolia biondii
MCO01G167 Micromonas commoda
MD15G1424000 Malus domestica
Medtr4g087280 Medicago truncatula
MELO3C017760.2 Cucumis melo
Migut.G01222 Erythranthe guttata
Nitab4.5_0000122g0140 Nicotiana tabacum
Nitab4.5_0009616g0020 Nicotiana tabacum
Nitab4.5_0011921g0010 Nicotiana tabacum
Nn1g09646 Nelumbo nucifera
Oeu020813.1 Olea europaea
Os02g0606100 Oryza sativa ssp. japonica
Peaxi162Scf00075g01544 Petunia axillaris
PGR142G0872 Punica granatum
Phvul.003G296400 Phaseolus vulgaris
Potri.013G126300 Populus trichocarpa
Pp3c6_14240 Physcomitrium patens
PRCOL_00000684 Prasinoderma coloniale
Prupe.1G207000 Prunus persica
Psat1g217120 Pisum sativum
Psat7g121400 Pisum sativum
PSO675G4502 Papaver somniferum
PSO732G0749 Papaver somniferum
QL10p055731 Quercus lobata
RcHm_v2.0_Chr2g0123631 Rosa chinensis
Rhsim04G0106800 Rhododendron simsii
Sabra13G0105600 Salix brachista
SalBow3G0226 Salvia bowleyana
Sc25g0002780 Simmondsia chinensis
Sed0009334 Sechium edule
SEGI_27162 Sequoiadendron giganteum
SEGI_32957 Sequoiadendron giganteum
SGA_v2.0_scaffold12G06184 Striga asiatica
SGA_v2.0_scaffold130G34334 Striga asiatica
SGA_v2.0_scaffold54G19619 Striga asiatica
SGA_v2.0_scaffold649G53360 Striga asiatica
SHI30329 Sapria himalayana
SMO145G0177 Selaginella moellendorffii
Solyc08g014060.4 Solanum lycopersicum
Sopen08g004940 Solanum pennellii
Sp5g28150 Schrenkiella parvula
TAR365G0102 Trochodendron aralioides
THA.LOC104813938 Tarenaya hassleriana
Thecc.01G302200 Theobroma cacao
Thecc.04G166200 Theobroma cacao
Thhalv10018413m.g Eutrema salsugineum
TPR.G23517 Trifolium pratense
TWI63G1273 Tripterygium wilfordii
unitig_92.g28214 Utricularia gibba
unitig_92.g28215 Utricularia gibba
vmacro09048 Vaccinium macrocarpon
VMungo0251G3269 Vigna mungo
Zm00001eb246620 Zea mays

User provided reference genes

Program Settings