Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p41500 Brassica napus
Aa31LG2G14490 Aethionema arabicum
Aa31LG9G15870 Aethionema arabicum
Aa31LG9G15880 Aethionema arabicum
Actinidia25714 Actinidia chinensis
Actinidia25715 Actinidia chinensis
Ah.12g056120 Amaranthus hybridus
AL1G31860 Arabidopsis lyrata
AL1G37050 Arabidopsis lyrata
AL1G49590 Arabidopsis lyrata
Aqoxy3G01755 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.11I9TD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CK7EWS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G7W534 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JB60CZ Arachis hypogaea
AT1G23270 Arabidopsis thaliana
AT1G31460 Arabidopsis thaliana
ATR0369G001 Amborella trichopoda
Atru.chr6.2120 Acer truncatum
AUR62022385 Chenopodium quinoa
AUR62027297 Chenopodium quinoa
BcaB07g32316 Brassica carinata
BcaB07g32805 Brassica carinata
BcaC05g26235 Brassica carinata
BcaC05g26236 Brassica carinata
BcaC05g27174 Brassica carinata
BolC5t30946H Brassica oleracea
BraA09t39642Z Brassica rapa
C05p22480 Brassica napus
CAN.G22.3 Capsicum annuum
CANSAT01G1003 Cannabis sativa
CARHR023710 Cardamine hirsuta
CARHR030980 Cardamine hirsuta
Carub.0001s2285 Capsella rubella
Carub.0001s2286 Capsella rubella
Carub.0001s2988 Capsella rubella
Ca_25075_v3 Cicer arietinum L.
Cc00_g01150 Coffea canephora
CDE11G1044 Ceratophyllum demersum
Cfa012645 Carpinus fangiana
Cfa012646 Carpinus fangiana
Cfa012647 Carpinus fangiana
Ciclev10002053m.g Citrus clementina
CiPaw.10G109500 Carya illinoinensis
CiPaw.11G075300 Carya illinoinensis
ClCG07G011270 Citrullus lanatus
COL.COLO4_16714 Corchorus olitorius
Cpa.g.sc305.1 Carica papaya
CsaV3_4G006970 Cucumis sativus L.
DCAR_030955 Daucus carota
Dinv03828 Davidia involucrata
Dinv09432 Davidia involucrata
Duzib084G1118 Durio zibethinus
ECA232G2780 Erigeron canadensis
ECA233G2979 Erigeron canadensis
EL10Ac5g11882 Beta vulgaris
Eucgr.E01174 Eucalyptus grandis
Eucgr.L01782 Eucalyptus grandis
FAN04G2949 Fragaria x ananassa
FAN08G2611 Fragaria x ananassa
FAN13G2818 Fragaria x ananassa
FAN18G1897 Fragaria x ananassa
FvH4_5g24380 Fragaria vesca
Glyma.01G150900 Glycine max
Glyma.01G151000 Glycine max
Glyma.09G215900 Glycine max
Glyma.09G216000 Glycine max
HanXRQChr17g0539691 Helianthus annuus
Haze_08011 Corylus avellana
Haze_08012 Corylus avellana
Haze_08014 Corylus avellana
Hma1.2p1_0317F.1_g123280 Hydrangea macrophylla
HPP92_022730 Vanilla planifolia
Lalb_Chr05g0215321 Lupinus albus
Lalb_Chr16g0380581 Lupinus albus
Lj2g0019897 Lotus japonicus
Lj2g0023539 Lotus japonicus
Lj8A379T44 Lonicera japonica
Lsat_1_v5_gn_6_15401 Lactuca sativa
Manes.17G005300 Manihot esculenta
MBI04_g30782_MAGBIO Magnolia biondii
MD16G1288300 Malus domestica
Medtr5g026380 Medicago truncatula
Medtr5g026390 Medicago truncatula
MELO3C016247.2 Cucumis melo
Migut.E01390 Erythranthe guttata
MSTRG.13922 Avicennia marina
Nitab4.5_0000183g0040 Nicotiana tabacum
Nitab4.5_0004181g0010 Nicotiana tabacum
Nn1g09229 Nelumbo nucifera
Nn3g19194 Nelumbo nucifera
Nn3g19195 Nelumbo nucifera
Oeu057151.1 Olea europaea
Os06g0710900 Oryza sativa ssp. japonica
Peaxi162Scf00445g00001 Petunia axillaris
PGR042G3936 Punica granatum
PGSC0003DMG400041236 Solanum tuberosum
Phvul.002G124800 Phaseolus vulgaris
Phvul.002G124900 Phaseolus vulgaris
Potri.001G128600 Populus trichocarpa
Prupe.5G017000 Prunus persica
Psat2g143520 Pisum sativum
Psat2g143800 Pisum sativum
PSO063G5355 Papaver somniferum
PSO782G4627 Papaver somniferum
QL12p002187 Quercus lobata
QL12p002196 Quercus lobata
RcHm_v2.0_Chr7g0214771 Rosa chinensis
Rhsim05G0122600 Rhododendron simsii
Sabra01G0098900 Salix brachista
SalBow2G1093 Salvia bowleyana
SalBow5G1394 Salvia bowleyana
SalBow6G3245 Salvia bowleyana
SalBow6G4547 Salvia bowleyana
SalBow7G0563 Salvia bowleyana
SalBow8G0134 Salvia bowleyana
SalBow8G0427 Salvia bowleyana
Sc22g0002200 Simmondsia chinensis
Sed0006364 Sechium edule
SEGI_24603 Sequoiadendron giganteum
SGA_v2.0_scaffold121G33048 Striga asiatica
SGA_v2.0_scaffold241G44185 Striga asiatica
SGA_v2.0_scaffold447G51756 Striga asiatica
Solyc07g055880.1 Solanum lycopersicum
Sopen07g029250 Solanum pennellii
Sp1g27260 Schrenkiella parvula
TAR629G2553 Trochodendron aralioides
TAR636G3359 Trochodendron aralioides
THA.LOC104814380 Tarenaya hassleriana
Thecc.03G323400 Theobroma cacao
Thhalv10008233m.g Eutrema salsugineum
Thhalv10009724m.g Eutrema salsugineum
TPR.G17242 Trifolium pratense
TPR.G17269 Trifolium pratense
TPR.G23178 Trifolium pratense
TPR.G36141 Trifolium pratense
TPR.G36193 Trifolium pratense
TPR.G902 Trifolium pratense
TWI32G0688 Tripterygium wilfordii
TWI60G1368 Tripterygium wilfordii
vmacro19764 Vaccinium macrocarpon
VMungo0464G0602 Vigna mungo
VMungo1215G1205 Vigna mungo
VMungo1215G2329 Vigna mungo
Zm00001eb227690 Zea mays

User provided reference genes

Program Settings