Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p05070 Brassica napus
A03p61820 Brassica napus
Aa31sc810G10 Aethionema arabicum
Actinidia39605 Actinidia chinensis
AL7G18430 Arabidopsis lyrata
Aqoxy7G00925 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EYB30S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QID06X Arachis hypogaea
AT4G33140 Arabidopsis thaliana
ATR0099G089 Amborella trichopoda
Atru.chr7.1799 Acer truncatum
AUR62025326 Chenopodium quinoa
AUR62028337 Chenopodium quinoa
BcaC09g52118 Brassica carinata
BcaNung02154 Brassica carinata
BolC1t00534H Brassica oleracea
BolC7t46394H Brassica oleracea
BraA01t00489Z Brassica rapa
BraA03t15220Z Brassica rapa
C01p05540 Brassica napus
C07p59500 Brassica napus
CAN.G88.12 Capsicum annuum
CANSAT56G1537 Cannabis sativa
CARHR241160 Cardamine hirsuta
Carub.0007s0732 Capsella rubella
Ca_02313_v3 Cicer arietinum L.
Ca_21349_v3 Cicer arietinum L.
Cc00_g13790 Coffea canephora
CDE05G1368 Ceratophyllum demersum
CDE06G1243 Ceratophyllum demersum
CDE07G0654 Ceratophyllum demersum
Cfa002928 Carpinus fangiana
Ciclev10008817m.g Citrus clementina
CiPaw.03G199200 Carya illinoinensis
ClCG03G014710 Citrullus lanatus
COL.COLO4_21182 Corchorus olitorius
Cpa.g.sc82.43 Carica papaya
Cre16.g661550 Chlamydomonas reinhardtii
CsaV3_1G041450 Cucumis sativus L.
CSS0045452 Camellia sinensis var. sinensis
DCAR_024788 Daucus carota
Dinv25492 Davidia involucrata
Dinv42438 Davidia involucrata
Duzib150G0538 Durio zibethinus
Duzib168G1130 Durio zibethinus
Duzib187G0988 Durio zibethinus
EL10Ac7g16303 Beta vulgaris
EL10Ac8g18946 Beta vulgaris
EL10Ac8g18949 Beta vulgaris
Eucgr.C00758 Eucalyptus grandis
FAN19G0176 Fragaria x ananassa
FAN23G0045 Fragaria x ananassa
FAN26G0153 Fragaria x ananassa
FAN26G2084 Fragaria x ananassa
FvH4_1g09650 Fragaria vesca
Glyma.09G077400 Glycine max
Glyma.13G115600 Glycine max
Glyma.17G044200 Glycine max
Glyma.17G255700 Glycine max
Gohir.A06G082100 Gossypium hirsutum
Gohir.A07G017900 Gossypium hirsutum
Gohir.D06G081300 Gossypium hirsutum
Gohir.D07G017700 Gossypium hirsutum
Gorai.001G018400 Gossypium raimondii
Gorai.010G094600 Gossypium raimondii
GSVIVG01014997001 Vitis vinifera
Haze_26081 Corylus avellana
HPP92_002369 Vanilla planifolia
HPP92_019108 Vanilla planifolia
HPP92_027596 Vanilla planifolia
Hund08917 Selenicereus undatus
Lalb_Chr07g0181481 Lupinus albus
Lalb_Chr12g0200391 Lupinus albus
Lalb_Chr13g0299131 Lupinus albus
Lj4g0025754 Lotus japonicus
Lj6g0001650 Lotus japonicus
Lj7A694G45 Lonicera japonica
Manes.16G088800 Manihot esculenta
Mapoly0181s0009 Marchantia polymorpha
MBI19_g32876_MAGBIO Magnolia biondii
MD02G1105400 Malus domestica
MD15G1225300 Malus domestica
Medtr2g044900 Medicago truncatula
Medtr4g124450 Medicago truncatula
MELO3C015557.2 Cucumis melo
Migut.J00869 Erythranthe guttata
Migut.L00513 Erythranthe guttata
Migut.L01605 Erythranthe guttata
MSTRG.19420 Avicennia marina
MSTRG.26504 Avicennia marina
Nitab4.5_0000055g0120 Nicotiana tabacum
Nitab4.5_0001114g0020 Nicotiana tabacum
Nn6g35744 Nelumbo nucifera
Oeu010852.1 Olea europaea
Oeu010853.1 Olea europaea
Oeu021232.1 Olea europaea
Oeu055315.1 Olea europaea
Os06g0192900 Oryza sativa ssp. japonica
Peaxi162Scf00452g00117 Petunia axillaris
Peaxi162Scf00452g00122 Petunia axillaris
PGR142G1085 Punica granatum
PGSC0003DMG400002304 Solanum tuberosum
Phvul.003G126200 Phaseolus vulgaris
Phvul.009G221900 Phaseolus vulgaris
Potri.006G216500 Populus trichocarpa
Pp3c5_26930 Physcomitrium patens
Pp3c6_3390 Physcomitrium patens
PRCOL_00003934 Prasinoderma coloniale
Prupe.7G189700 Prunus persica
Psat1g139120 Pisum sativum
Psat4g019920 Pisum sativum
PSO104G0051 Papaver somniferum
PSO421G0417 Papaver somniferum
QL11p003443 Quercus lobata
RcHm_v2.0_Chr2g0096491 Rosa chinensis
RcHm_v2.0_Chr2g0117071 Rosa chinensis
Rhsim05G0001200 Rhododendron simsii
Sabra06G0166900 Salix brachista
SalBow6G3026 Salvia bowleyana
Sc14g0000920 Simmondsia chinensis
Sed0003985 Sechium edule
SEGI_21946 Sequoiadendron giganteum
SEGI_31296 Sequoiadendron giganteum
SEGI_31523 Sequoiadendron giganteum
SGA_v2.0_scaffold31G12703 Striga asiatica
SHI27969 Sapria himalayana
Solyc07g017700.3 Solanum lycopersicum
Solyc07g017710.1 Solanum lycopersicum
Sopen07g006530 Solanum pennellii
Sp7g30880 Schrenkiella parvula
TAR383G0985 Trochodendron aralioides
THA.LOC104804446 Tarenaya hassleriana
Thecc.09G067900 Theobroma cacao
Thhalv10025620m.g Eutrema salsugineum
TPR.G12689 Trifolium pratense
TPR.G14067 Trifolium pratense
TPR.G25386 Trifolium pratense
TWI34G1666 Tripterygium wilfordii
TWI63G0336 Tripterygium wilfordii
unitig_578.g15872 Utricularia gibba
vmacro06379 Vaccinium macrocarpon
VMungo1215G2768 Vigna mungo
VMungo1309G1826 Vigna mungo
Zm00001eb045610 Zea mays
Zm00001eb374160 Zea mays

User provided reference genes

Program Settings