Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p15850 Brassica napus
Aa31LG2G2090 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2458 Anthoceros agrestis
Actinidia05822 Actinidia chinensis
Ah.05g177160 Amaranthus hybridus
AL2G19260 Arabidopsis lyrata
Aqoxy3G01990 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8Z97YG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9NJ9Q0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SX2T07 Arachis hypogaea
AT1G64850 Arabidopsis thaliana
ATR0829G090 Amborella trichopoda
ATR0829G133 Amborella trichopoda
Atru.chr2.1677 Acer truncatum
AUR62038020 Chenopodium quinoa
BcaB05g24444 Brassica carinata
BcaC03g15075 Brassica carinata
BcaC03g15076 Brassica carinata
BolC2t08702H Brassica oleracea
C02p26310 Brassica napus
CAN.G700.32 Capsicum annuum
CANSAT01G0826 Cannabis sativa
CARHR056260 Cardamine hirsuta
Carub.0012s0005 Capsella rubella
Cc02_g26360 Coffea canephora
CDE04G3605 Ceratophyllum demersum
Ciclev10032932m.g Citrus clementina
CiPaw.01G068900 Carya illinoinensis
CiPaw.01G069000 Carya illinoinensis
CiPaw.02G036100 Carya illinoinensis
ClCG05G002560 Citrullus lanatus
ClCG05G002570 Citrullus lanatus
COL.COLO4_08549 Corchorus olitorius
Cpa.g.sc73.77 Carica papaya
CsaV3_3G010000 Cucumis sativus L.
CsaV3_3G010010 Cucumis sativus L.
DCAR_015753 Daucus carota
DCAR_029189 Daucus carota
Dinv43532 Davidia involucrata
Dinv43977 Davidia involucrata
Duzib128G1721 Durio zibethinus
Duzib177G0632 Durio zibethinus
ECA234G1488 Erigeron canadensis
Eucgr.E01765 Eucalyptus grandis
FAN01G2901 Fragaria x ananassa
FAN03G1308 Fragaria x ananassa
FAN06G2558 Fragaria x ananassa
FAN10G1987 Fragaria x ananassa
FvH4_7g07320 Fragaria vesca
Glyma.03G098300 Glycine max
Glyma.03G098400 Glycine max
Glyma.07G123500 Glycine max
Gohir.A11G222400 Gossypium hirsutum
Gohir.A13G082000 Gossypium hirsutum
Gohir.D11G235900 Gossypium hirsutum
Gohir.D13G100100 Gossypium hirsutum
Gorai.007G248800 Gossypium raimondii
Gorai.013G112500 Gossypium raimondii
GSVIVG01011324001 Vitis vinifera
HanXRQChr11g0330951 Helianthus annuus
Haze_15802 Corylus avellana
Hma1.2p1_0353F.1_g133370 Hydrangea macrophylla
HPP92_003408 Vanilla planifolia
HPP92_014406 Vanilla planifolia
Hund26918 Selenicereus undatus
Lalb_Chr07g0194821 Lupinus albus
Lalb_Chr12g0210171 Lupinus albus
Lj3g0015892 Lotus japonicus
Lj7A558T36 Lonicera japonica
Lj9A615G51 Lonicera japonica
Lj9C612T3 Lonicera japonica
Lsat_1_v5_gn_4_42301 Lactuca sativa
Manes.09G132000 Manihot esculenta
Mapoly0125s0044 Marchantia polymorpha
MCO09G424 Micromonas commoda
MD02G1236200 Malus domestica
MD02G1236300 Malus domestica
MD07G1078400 Malus domestica
Medtr8g009870 Medicago truncatula
MELO3C006222.2 Cucumis melo
MELO3C006223.2 Cucumis melo
Migut.B01443 Erythranthe guttata
MSTRG.17088 Avicennia marina
Nitab4.5_0000050g0110 Nicotiana tabacum
Nitab4.5_0004594g0120 Nicotiana tabacum
Nitab4.5_0004800g0050 Nicotiana tabacum
Nitab4.5_0005106g0020 Nicotiana tabacum
Nn3g21165 Nelumbo nucifera
Nn3g21169 Nelumbo nucifera
Oeu041522.2 Olea europaea
Oeu060687.1 Olea europaea
Os04g0601400 Oryza sativa ssp. japonica
Os04g0601500 Oryza sativa ssp. japonica
Peaxi162Scf00245g00322 Petunia axillaris
Peaxi162Scf00250g00049 Petunia axillaris
Peaxi162Scf00592g00452 Petunia axillaris
PGR042G1459 Punica granatum
PGSC0003DMG400001805 Solanum tuberosum
PGSC0003DMG400013231 Solanum tuberosum
Phvul.010G038600 Phaseolus vulgaris
Phvul.010G038700 Phaseolus vulgaris
Potri.013G072600 Populus trichocarpa
Pp3c12_14230 Physcomitrium patens
Pp3c3_35520 Physcomitrium patens
Prupe.2G101300 Prunus persica
Psat4g215840 Pisum sativum
PSO063G5995 Papaver somniferum
PSO782G4714 Papaver somniferum
QL04p052584 Quercus lobata
QL04p052587 Quercus lobata
RcHm_v2.0_Chr1g0340081 Rosa chinensis
Rhsim07G0045800 Rhododendron simsii
Sabra13G0062500 Salix brachista
Sc26g0002010 Simmondsia chinensis
Sed0012289 Sechium edule
Sed0020247 Sechium edule
SEGI_19507 Sequoiadendron giganteum
SEGI_22185 Sequoiadendron giganteum
SEGI_22584 Sequoiadendron giganteum
SEGI_29719 Sequoiadendron giganteum
SEGI_29788 Sequoiadendron giganteum
SEGI_33126 Sequoiadendron giganteum
SEGI_41139 Sequoiadendron giganteum
SGA_v2.0_scaffold98G29401 Striga asiatica
SMO137G0328 Selaginella moellendorffii
Solyc01g081190.4 Solanum lycopersicum
Solyc10g061870.1 Solanum lycopersicum
Sopen01g032770 Solanum pennellii
Sp5g18870 Schrenkiella parvula
TAR629G1606 Trochodendron aralioides
TAR629G2600 Trochodendron aralioides
THA.LOC104805728 Tarenaya hassleriana
Thecc.05G232400 Theobroma cacao
Thhalv10010860m.g Eutrema salsugineum
Thhalv10011151m.g Eutrema salsugineum
TPR.G17364 Trifolium pratense
TWI32G1299 Tripterygium wilfordii
unitig_0.g1357 Utricularia gibba
unitig_61.g26432 Utricularia gibba
vmacro13581 Vaccinium macrocarpon
vmacro13584 Vaccinium macrocarpon
VMungo0331G1938 Vigna mungo
Zm00001eb071820 Zea mays
Zm00001eb328940 Zea mays
Zm00001eb430320 Zea mays

User provided reference genes

Program Settings