Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p26710 Brassica napus
Aa31LG8G12200 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2372 Anthoceros agrestis
Actinidia26371 Actinidia chinensis
Actinidia38722 Actinidia chinensis
Actinidia38723 Actinidia chinensis
Ah.14g079340 Amaranthus hybridus
AL3G44790 Arabidopsis lyrata
Aqoxy7G02403 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0L2UMW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W0WM15 Arachis hypogaea
AT2G11000 Arabidopsis thaliana
ATR0800G098 Amborella trichopoda
Atru.chr7.1956 Acer truncatum
AUR62011184 Chenopodium quinoa
AUR62013300 Chenopodium quinoa
BcaB02g10775 Brassica carinata
BcaC01g02222 Brassica carinata
BolSC21t60229H Brassica oleracea
BraA06t25606Z Brassica rapa
C03p67700 Brassica napus
CAN.G1663.1 Capsicum annuum
CANSAT11G2540 Cannabis sativa
CARHR104890 Cardamine hirsuta
Carub.0003s2755 Capsella rubella
Ca_06948_v3 Cicer arietinum L.
Ca_21665_v3 Cicer arietinum L.
CBR_g29413 Chara braunii
Cc06_g08000 Coffea canephora
Cc06_g08010 Coffea canephora
CDE05G1862 Ceratophyllum demersum
CDE05G1976 Ceratophyllum demersum
Cfa002299 Carpinus fangiana
Ciclev10007583m.g Citrus clementina
CiPaw.03G249200 Carya illinoinensis
ClCG06G011590 Citrullus lanatus
COL.COLO4_06980 Corchorus olitorius
COL.COLO4_15579 Corchorus olitorius
COL.COLO4_21409 Corchorus olitorius
COL.COLO4_23752 Corchorus olitorius
COL.COLO4_37048 Corchorus olitorius
Cpa.g.sc46.51 Carica papaya
Cre06.g300650 Chlamydomonas reinhardtii
CsaV3_1G027890 Cucumis sativus L.
CSS0021683 Camellia sinensis var. sinensis
DCAR_009327 Daucus carota
Dinv41468 Davidia involucrata
Duzib150G0407 Durio zibethinus
Duzib187G0353 Durio zibethinus
ECA236G3625 Erigeron canadensis
EL10Ac8g18733 Beta vulgaris
Eucgr.E03534 Eucalyptus grandis
FAN06G0842 Fragaria x ananassa
FAN06G4723 Fragaria x ananassa
FAN06G5005 Fragaria x ananassa
FAN10G2766 Fragaria x ananassa
FAN10G4062 Fragaria x ananassa
FAN19G1407 Fragaria x ananassa
FAN23G0864 Fragaria x ananassa
FAN26G1428 Fragaria x ananassa
FAN26G2291 Fragaria x ananassa
FAN28G1162 Fragaria x ananassa
FvH4_1g02530 Fragaria vesca
FvH4_1g29180 Fragaria vesca
FvH4_7g23890 Fragaria vesca
Glyma.13G160800 Glycine max
Glyma.17G110600 Glycine max
Gohir.A08G088900 Gossypium hirsutum
Gohir.D08G100100 Gossypium hirsutum
Gorai.004G107900 Gossypium raimondii
GSVIVG01002648001 Vitis vinifera
GSVIVG01012804001 Vitis vinifera
GSVIVG01015604001 Vitis vinifera
HanXRQChr05g0143851 Helianthus annuus
Haze_25489 Corylus avellana
Haze_25491 Corylus avellana
HPP92_010843 Vanilla planifolia
Hund26401 Selenicereus undatus
Hund26552 Selenicereus undatus
Lalb_Chr12g0198261 Lupinus albus
Lj4g0015768 Lotus japonicus
Lj7A435G51 Lonicera japonica
Lsat_1_v5_gn_8_61061 Lactuca sativa
Manes.06G046300 Manihot esculenta
Mapoly0005s0239 Marchantia polymorpha
MBI13_g29624_MAGBIO Magnolia biondii
MD02G1022800 Malus domestica
MD15G1165500 Malus domestica
Medtr4g115450 Medicago truncatula
MELO3C010304.2 Cucumis melo
Migut.K00420 Erythranthe guttata
MSTRG.26350 Avicennia marina
Nitab4.5_0000374g0090 Nicotiana tabacum
Nitab4.5_0005159g0010 Nicotiana tabacum
Nitab4.5_0005159g0020 Nicotiana tabacum
Nn2g12129 Nelumbo nucifera
Oeu052176.1 Olea europaea
Os02g0803250 Oryza sativa ssp. japonica
Peaxi162Scf00088g01225 Petunia axillaris
PGR142G3543 Punica granatum
Phvul.003G169500 Phaseolus vulgaris
Potri.006G065000 Populus trichocarpa
Potri.018G125171 Populus trichocarpa
Potri.T124807 Populus trichocarpa
Pp3c26_8550 Physcomitrium patens
PRCOL_00001705 Prasinoderma coloniale
Prupe.7G249300 Prunus persica
Psat4g036440 Pisum sativum
Psat6g224720 Pisum sativum
PSO017G2350 Papaver somniferum
PSO170G6846 Papaver somniferum
QL02p090053 Quercus lobata
RcHm_v2.0_Chr2g0087561 Rosa chinensis
RcHm_v2.0_Chr5g0051701 Rosa chinensis
Rhsim03G0251800 Rhododendron simsii
Rhsim05G0138400 Rhododendron simsii
Rhsim10G0150400 Rhododendron simsii
Rhsim13G0106800 Rhododendron simsii
Sabra06G0047500 Salix brachista
Sabra18G0106500 Salix brachista
SalBow1G1849 Salvia bowleyana
Sc18g0000280 Simmondsia chinensis
Sed0022210 Sechium edule
SEGI_14008 Sequoiadendron giganteum
SGA_v2.0_scaffold63G21813 Striga asiatica
SMO174G0034 Selaginella moellendorffii
Solyc07g007810.3 Solanum lycopersicum
Sopen07g001100 Solanum pennellii
Sp3g26260 Schrenkiella parvula
Sp3g26280 Schrenkiella parvula
TAR625G1134 Trochodendron aralioides
THA.LOC104826555 Tarenaya hassleriana
Thecc.09G133700 Theobroma cacao
Thhalv10022576m.g Eutrema salsugineum
Thhalv10022959m.g Eutrema salsugineum
TPR.G7618 Trifolium pratense
TPR.G8947 Trifolium pratense
TWI32G0152 Tripterygium wilfordii
TWI63G0111 Tripterygium wilfordii
unitig_0.g2715 Utricularia gibba
unitig_0.g2716 Utricularia gibba
vmacro06156 Vaccinium macrocarpon
vmacro06157 Vaccinium macrocarpon
VMungo1215G2132 Vigna mungo
Zm00001eb192130 Zea mays

User provided reference genes

Program Settings