Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p01690 Brassica napus
Aa31LG5G1890 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3848 Anthoceros agrestis
Actinidia21022 Actinidia chinensis
Actinidia25825 Actinidia chinensis
AL6G50910 Arabidopsis lyrata
Aqoxy22s002 Aquilegia oxysepala
Aqoxy22s003 Aquilegia oxysepala
Aqoxy2G02861 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3WZ8U6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4RF6J7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5FY99X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ALS4S9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U1QXXC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V7ULXX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZR0QLK Arachis hypogaea
AT4G02220 Arabidopsis thaliana
ATR0665G541 Amborella trichopoda
Atru.chr5.1082 Acer truncatum
AUR62011856 Chenopodium quinoa
AUR62024701 Chenopodium quinoa
BcaB01g02068 Brassica carinata
BcaC04g24048 Brassica carinata
BolC9t53111H Brassica oleracea
BraA09t35824Z Brassica rapa
C09p01760 Brassica napus
CAN.G1987.2 Capsicum annuum
CAN.G726.22 Capsicum annuum
CARHR250440 Cardamine hirsuta
Carub.0006s3494 Capsella rubella
CBR_g22284 Chara braunii
Cc01_g21150 Coffea canephora
CDE02G1252 Ceratophyllum demersum
Cfa010639 Carpinus fangiana
Ciclev10020359m.g Citrus clementina
CiPaw.01G112900 Carya illinoinensis
ClCG03G014110 Citrullus lanatus
COL.COLO4_33288 Corchorus olitorius
Cpa.g.sc151.36 Carica papaya
Cre03.g149500 Chlamydomonas reinhardtii
CsaV3_1G042140 Cucumis sativus L.
CSS0031632 Camellia sinensis var. sinensis
CSS0046497 Camellia sinensis var. sinensis
DCAR_005781 Daucus carota
DCAR_006919 Daucus carota
DCAR_008439 Daucus carota
DCAR_022674 Daucus carota
Dinv33081 Davidia involucrata
Duzib128G0399 Durio zibethinus
EL10Ac2g03409 Beta vulgaris
EL10Ac9g21113 Beta vulgaris
EL10Ac9g21129 Beta vulgaris
Eucgr.D00103 Eucalyptus grandis
Eucgr.D00338 Eucalyptus grandis
FAN11G2688 Fragaria x ananassa
FAN16G0469 Fragaria x ananassa
FAN21G1757 Fragaria x ananassa
FAN25G2462 Fragaria x ananassa
FvH4_3g14570 Fragaria vesca
Glyma.09G081700 Glycine max
Glyma.11G155468 Glycine max
Glyma.12G070400 Glycine max
Gohir.A11G162200 Gossypium hirsutum
Gohir.D11G168500 Gossypium hirsutum
Gorai.007G180000 Gossypium raimondii
GSVIVG01028059001 Vitis vinifera
HanXRQChr04g0111201 Helianthus annuus
HanXRQChr04g0111211 Helianthus annuus
HanXRQChr04g0114701 Helianthus annuus
Haze_03587 Corylus avellana
Haze_03588 Corylus avellana
HPP92_013737 Vanilla planifolia
Lalb_Chr01g0008881 Lupinus albus
Lj1A21G66 Lonicera japonica
Lj1A21T72 Lonicera japonica
Lj1g0024820 Lotus japonicus
Lj5C676G0 Lonicera japonica
Lj6g0027180 Lotus japonicus
Lsat_1_v5_gn_8_164980 Lactuca sativa
Manes.03G058600 Manihot esculenta
Manes.05G000401 Manihot esculenta
Mapoly0037s0138 Marchantia polymorpha
MBI19_g05150_MAGBIO Magnolia biondii
MCO15G205 Micromonas commoda
MD05G1235200 Malus domestica
MD10G1211200 Malus domestica
Medtr7g105530 Medicago truncatula
Medtr7g105630 Medicago truncatula
MELO3C015632.2 Cucumis melo
Migut.D00121 Erythranthe guttata
MSTRG.13027 Avicennia marina
Nitab4.5_0000529g0190 Nicotiana tabacum
Nitab4.5_0000809g0080 Nicotiana tabacum
Nn8g40249 Nelumbo nucifera
Oeu008336.1 Olea europaea
Oeu021746.1 Olea europaea
Os01g0578200 Oryza sativa ssp. japonica
Os03g0300200 Oryza sativa ssp. japonica
Peaxi162Scf00170g00624 Petunia axillaris
PGR044G0984 Punica granatum
PGR047G0002 Punica granatum
PGSC0003DMG400014794 Solanum tuberosum
Phvul.011G074000 Phaseolus vulgaris
Potri.002G201200 Populus trichocarpa
Pp3c22_7380 Physcomitrium patens
Pp3c25_650 Physcomitrium patens
PRCOL_00005294 Prasinoderma coloniale
Prupe.1G192100 Prunus persica
Prupe.4G131100 Prunus persica
Psat3g030640 Pisum sativum
PSO765G0055 Papaver somniferum
PSO782G1813 Papaver somniferum
QL06p006883 Quercus lobata
RcHm_v2.0_Chr5g0024021 Rosa chinensis
Rhsim01G0287800 Rhododendron simsii
Rhsim13G0007900 Rhododendron simsii
Sabra02G0157700 Salix brachista
SalBow6G1077 Salvia bowleyana
Sc05g0003490 Simmondsia chinensis
Sed0013075 Sechium edule
SEGI_10631 Sequoiadendron giganteum
SMO118G0558 Selaginella moellendorffii
SMO143G0306 Selaginella moellendorffii
SMO143G0318 Selaginella moellendorffii
Solyc08g076440.4 Solanum lycopersicum
Sopen08g025020 Solanum pennellii
Sp6g02120 Schrenkiella parvula
TAR365G0047 Trochodendron aralioides
THA.LOC104801289 Tarenaya hassleriana
Thecc.05G192400 Theobroma cacao
Thecc.05G196300 Theobroma cacao
Thhalv10028689m.g Eutrema salsugineum
TPR.G23365 Trifolium pratense
TPR.G32201 Trifolium pratense
TPR.G32202 Trifolium pratense
TWI23G0603 Tripterygium wilfordii
unitig_22.g5230 Utricularia gibba
VMungo0464G0625 Vigna mungo
Zm00001eb013970 Zea mays
Zm00001eb068830 Zea mays
Zm00001eb092500 Zea mays
Zm00001eb200250 Zea mays
Zm00001eb265340 Zea mays
Zm00001eb312720 Zea mays
Zm00001eb396540 Zea mays

User provided reference genes

Program Settings