Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p43130 Brassica napus
A06p30750 Brassica napus
A09p08510 Brassica napus
Aa31LG1G17870 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2803 Anthoceros agrestis
Actinidia06616 Actinidia chinensis
Ah.02g121530 Amaranthus hybridus
AL8G41300 Arabidopsis lyrata
Aqoxy5G02315 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DJM1RY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V5WWJ8 Arachis hypogaea
AT5G64040 Arabidopsis thaliana
ATR0987G005 Amborella trichopoda
Atru.chr4.905 Acer truncatum
AUR62003566 Chenopodium quinoa
AUR62017881 Chenopodium quinoa
BcaB02g09793 Brassica carinata
BcaB04g17222 Brassica carinata
BcaB04g20368 Brassica carinata
BcaB07g29717 Brassica carinata
BcaB08g36594 Brassica carinata
BcaC01g02658 Brassica carinata
BcaC01g02659 Brassica carinata
BcaC03g13890 Brassica carinata
BcaC03g18240 Brassica carinata
BcaC04g18786 Brassica carinata
BolC2t07163H Brassica oleracea
BolC2t12383H Brassica oleracea
BolC3t18491H Brassica oleracea
BolC7t41311H Brassica oleracea
BolC9t53875H Brassica oleracea
BraA02t09233Z Brassica rapa
BraA06t26017Z Brassica rapa
BraA09t36500Z Brassica rapa
C02p10930 Brassica napus
C02p63110 Brassica napus
C03p62290 Brassica napus
C09p09640 Brassica napus
CAN.G792.16 Capsicum annuum
CANSAT01G0911 Cannabis sativa
CARHR277950 Cardamine hirsuta
Carub.0008s2482 Capsella rubella
Ca_16917_v3 Cicer arietinum L.
CBR_g45633 Chara braunii
Cc10_g12590 Coffea canephora
CDE02G4401 Ceratophyllum demersum
CDE08G0648 Ceratophyllum demersum
Cfa002897 Carpinus fangiana
Ciclev10002687m.g Citrus clementina
CiPaw.03G121400 Carya illinoinensis
CiPaw.04G081900 Carya illinoinensis
ClCG01G015380 Citrullus lanatus
COL.COLO4_35748 Corchorus olitorius
Cpa.g.sc3.345 Carica papaya
Cre02.g082500 Chlamydomonas reinhardtii
CsaV3_6G041600 Cucumis sativus L.
CSS0010064 Camellia sinensis var. sinensis
CSS0045275 Camellia sinensis var. sinensis
DCAR_001211 Daucus carota
Dinv24366 Davidia involucrata
Duzib147G0711 Durio zibethinus
Duzib187G0538 Durio zibethinus
Duzib264G0557 Durio zibethinus
ECA247G1960 Erigeron canadensis
EL10Ac6g15302 Beta vulgaris
Eucgr.I00200 Eucalyptus grandis
FAN19G1208 Fragaria x ananassa
FvH4_1g24360 Fragaria vesca
Glyma.04G215800 Glycine max
Glyma.06G150300 Glycine max
Gohir.A05G384500 Gossypium hirsutum
Gohir.A11G226800 Gossypium hirsutum
Gohir.D11G230800 Gossypium hirsutum
Gorai.003G066700 Gossypium raimondii
Gorai.012G035200 Gossypium raimondii
GSVIVG01026478001 Vitis vinifera
HanXRQChr04g0107551 Helianthus annuus
Haze_25240 Corylus avellana
Hma1.2p1_0476F.1_g160790 Hydrangea macrophylla
HPP92_019391 Vanilla planifolia
Hund23270 Selenicereus undatus
Lalb_Chr13g0296451 Lupinus albus
Lj1g0024625 Lotus japonicus
Lj2A607T35 Lonicera japonica
Lj4g0001203 Lotus japonicus
Lsat_1_v5_gn_1_10061 Lactuca sativa
Manes.12G156000 Manihot esculenta
Mapoly0116s0042 Marchantia polymorpha
MBI03_g42548_MAGBIO Magnolia biondii
MBI06_g27435_MAGBIO Magnolia biondii
MBI06_g39404_MAGBIO Magnolia biondii
MCO09G058 Micromonas commoda
MD01G1004300 Malus domestica
MD15G1441800 Malus domestica
Medtr3g095540 Medicago truncatula
MELO3C008060.2 Cucumis melo
Migut.H00702 Erythranthe guttata
MSTRG.2649 Avicennia marina
Nitab4.5_0000673g0170 Nicotiana tabacum
Nitab4.5_0005544g0070 Nicotiana tabacum
Nn2g12180 Nelumbo nucifera
Nn5g28540 Nelumbo nucifera
Oeu037826.1 Olea europaea
Oeu050119.1 Olea europaea
Os12g0189400 Oryza sativa ssp. japonica
Peaxi162Scf01257g00019 Petunia axillaris
PGR008G0006 Punica granatum
PGR119G0239 Punica granatum
PGSC0003DMG400005805 Solanum tuberosum
Phvul.002G269400 Phaseolus vulgaris
Potri.005G063300 Populus trichocarpa
Potri.007G105900 Populus trichocarpa
PRCOL_00004565 Prasinoderma coloniale
Prupe.4G271200 Prunus persica
Psat5g063680 Pisum sativum
PSO541G2775 Papaver somniferum
PSO675G9377 Papaver somniferum
QL02p001672 Quercus lobata
RcHm_v2.0_Chr2g0120891 Rosa chinensis
Rhsim10G0133700 Rhododendron simsii
Sabra05G0052500 Salix brachista
Sabra07G0086700 Salix brachista
SalBow1G2748 Salvia bowleyana
Sc16g0003820 Simmondsia chinensis
Sed0010246 Sechium edule
Sed0019160 Sechium edule
SEGI_16120 Sequoiadendron giganteum
SGA_v2.0_scaffold370G50114 Striga asiatica
SMO144G0055 Selaginella moellendorffii
Solyc08g013670.3 Solanum lycopersicum
Sopen08g004510 Solanum pennellii
Sp2g27110 Schrenkiella parvula
TAR381G0300 Trochodendron aralioides
THA.LOC104800083 Tarenaya hassleriana
Thecc.01G132900 Theobroma cacao
Thhalv10005005m.g Eutrema salsugineum
TPR.G18740 Trifolium pratense
TWI75G0084 Tripterygium wilfordii
TWI79G1553 Tripterygium wilfordii
unitig_736.g22678 Utricularia gibba
unitig_899.g14682 Utricularia gibba
vmacro12795 Vaccinium macrocarpon
VMungo0251G2948 Vigna mungo
Zm00001eb138650 Zea mays
Zm00001eb409220 Zea mays

User provided reference genes

Program Settings