Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p06560 Brassica napus
A07p21330 Brassica napus
Aa31LG10G8140 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4043 Anthoceros agrestis
Actinidia11331 Actinidia chinensis
Actinidia11332 Actinidia chinensis
AL5G33730 Arabidopsis lyrata
Aqoxy1G00943 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.51PHKJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.56JAE5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.81LQDK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.86F40W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A5J8ZR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C1A3DY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LRZ4EZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TDW0BY Arachis hypogaea
AT3G52940 Arabidopsis thaliana
ATR0820G212 Amborella trichopoda
Atru.chr8.1640 Acer truncatum
Atru.chr8.940 Acer truncatum
AUR62033583 Chenopodium quinoa
AUR62041416 Chenopodium quinoa
BcaC02g09201 Brassica carinata
BcaC08g44614 Brassica carinata
BolC4t25573H Brassica oleracea
BolC6t37273H Brassica oleracea
BraA04t16360Z Brassica rapa
BraA07t29820Z Brassica rapa
C04p40000 Brassica napus
C06p20860 Brassica napus
C08p28220 Brassica napus
CAN.G824.25 Capsicum annuum
CANSAT80G0751 Cannabis sativa
CARHR162820 Cardamine hirsuta
Carub.0005s1942 Capsella rubella
Ca_11622_v3 Cicer arietinum L.
CBR_g23124 Chara braunii
CBR_g23126 Chara braunii
Cc06_g05210 Coffea canephora
Cc06_g05220 Coffea canephora
CDE02G3234 Ceratophyllum demersum
Cfa016531 Carpinus fangiana
Ciclev10012005m.g Citrus clementina
CiPaw.09G008300 Carya illinoinensis
ClCG10G019410 Citrullus lanatus
COL.COLO4_29821 Corchorus olitorius
Cpa.g.sc599.2 Carica papaya
CsaV3_3G036770 Cucumis sativus L.
CSS0010850 Camellia sinensis var. sinensis
CSS0036820 Camellia sinensis var. sinensis
DCAR_013955 Daucus carota
Dinv19824 Davidia involucrata
Dinv19825 Davidia involucrata
Dinv21262 Davidia involucrata
Duzib093G0601 Durio zibethinus
Duzib116G0400 Durio zibethinus
Duzib128G1524 Durio zibethinus
ECA233G3076 Erigeron canadensis
EL10Ac7g16996 Beta vulgaris
Eucgr.A01551 Eucalyptus grandis
Eucgr.E00489 Eucalyptus grandis
FAN02G1941 Fragaria x ananassa
FAN05G2920 Fragaria x ananassa
FAN05G4391 Fragaria x ananassa
FAN09G3384 Fragaria x ananassa
FAN14G0962 Fragaria x ananassa
FvH4_6g17830 Fragaria vesca
Glyma.10G065702 Glycine max
Glyma.13G150900 Glycine max
Gohir.A01G209400 Gossypium hirsutum
Gohir.D01G198500 Gossypium hirsutum
Gorai.002G242700 Gossypium raimondii
Gorai.002G242900 Gossypium raimondii
GSVIVG01033776001 Vitis vinifera
HanXRQChr02g0052331 Helianthus annuus
Haze_19532 Corylus avellana
Hma1.2p1_0611F.1_g188600 Hydrangea macrophylla
Hma1.2p1_0611F.1_g188610 Hydrangea macrophylla
Hma1.2p1_0651F.1_g195823 Hydrangea macrophylla
Hma1.2p1_0651F.1_g195826 Hydrangea macrophylla
HPP92_002061 Vanilla planifolia
HPP92_002062 Vanilla planifolia
Hund03537 Selenicereus undatus
Lalb_Chr02g0155121 Lupinus albus
Lj1C1155T7 Lonicera japonica
Lj5g0000259 Lotus japonicus
Lsat_1_v5_gn_2_16021 Lactuca sativa
Manes.09G060500 Manihot esculenta
Mapoly0024s0127 Marchantia polymorpha
MBI17_g11100_MAGBIO Magnolia biondii
MD12G1017500 Malus domestica
MD14G1015200 Malus domestica
Medtr1g061240 Medicago truncatula
MELO3C009431.2 Cucumis melo
Migut.J00988 Erythranthe guttata
MSTRG.19227 Avicennia marina
Nitab4.5_0001922g0020 Nicotiana tabacum
Nitab4.5_0010922g0020 Nicotiana tabacum
Nn2g13992 Nelumbo nucifera
Oeu018716.1 Olea europaea
Oeu022320.1 Olea europaea
Os01g0354200 Oryza sativa ssp. japonica
Os09g0565600 Oryza sativa ssp. japonica
Peaxi162Scf00433g00811 Petunia axillaris
PGR004G1028 Punica granatum
PGSC0003DMG400002720 Solanum tuberosum
Phvul.007G223700 Phaseolus vulgaris
Potri.006G116200 Populus trichocarpa
Pp3c16_12420 Physcomitrium patens
Prupe.7G118200 Prunus persica
Prupe.8G104900 Prunus persica
Psat6g078920 Pisum sativum
PSO063G2742 Papaver somniferum
PSO339G1354 Papaver somniferum
QL07p040641 Quercus lobata
QL07p040645 Quercus lobata
RcHm_v2.0_Chr3g0472081 Rosa chinensis
Rhsim03G0081600 Rhododendron simsii
Sabra06G0090800 Salix brachista
SalBow6G2903 Salvia bowleyana
SalBow8G3620 Salvia bowleyana
Sc02g0001150 Simmondsia chinensis
Sed0010777 Sechium edule
SEGI_04533 Sequoiadendron giganteum
SEGI_05693 Sequoiadendron giganteum
SEGI_09995 Sequoiadendron giganteum
SEGI_24195 Sequoiadendron giganteum
SGA_v2.0_scaffold75G24798 Striga asiatica
SHI27868 Sapria himalayana
SMO146G0185 Selaginella moellendorffii
Solyc09g009040.3 Solanum lycopersicum
Sopen09g003770 Solanum pennellii
Sp5g09390 Schrenkiella parvula
TAR623G0074 Trochodendron aralioides
THA.LOC104805104 Tarenaya hassleriana
Thecc.05G080500 Theobroma cacao
Thecc.08G186700 Theobroma cacao
Thhalv10010464m.g Eutrema salsugineum
TPR.G5654 Trifolium pratense
TWI53G0558 Tripterygium wilfordii
TWI77G0453 Tripterygium wilfordii
unitig_27.g25398 Utricularia gibba
vmacro07366 Vaccinium macrocarpon
VMungo0720G0877 Vigna mungo
Zm00001eb109520 Zea mays

User provided reference genes

Program Settings