Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p03300 Brassica napus
Aa31LG10G4000 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.389 Anthoceros agrestis
Actinidia06755 Actinidia chinensis
Ah.12g060430 Amaranthus hybridus
AL1G57790 Arabidopsis lyrata
Aqoxy3G02839 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0YQ56L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1JMX4I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C5A6Z1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NIKC7C Arachis hypogaea
AT1G50170 Arabidopsis thaliana
ATR0661G518 Amborella trichopoda
Atru.chr6.2358 Acer truncatum
AUR62024784 Chenopodium quinoa
AUR62032437 Chenopodium quinoa
BcaC01g01215 Brassica carinata
BolC3t21265H Brassica oleracea
BraA08t32363Z Brassica rapa
C03p89510 Brassica napus
CAN.G1799.12 Capsicum annuum
CANSAT64G2419 Cannabis sativa
CARHR040200 Cardamine hirsuta
CARHR111710 Cardamine hirsuta
Carub.0001s3930 Capsella rubella
Ca_04172_v3 Cicer arietinum L.
CBR_g4824 Chara braunii
Cc07_g01870 Coffea canephora
CDE06G0683 Ceratophyllum demersum
Cfa007386 Carpinus fangiana
Cfa007391 Carpinus fangiana
Cfa012581 Carpinus fangiana
Ciclev10016757m.g Citrus clementina
CiPaw.02G035100 Carya illinoinensis
CiPaw.02G035200 Carya illinoinensis
CiPaw.03G042000 Carya illinoinensis
ClCG00G002150 Citrullus lanatus
ClCG09G019170 Citrullus lanatus
COL.COLO4_29086 Corchorus olitorius
Cpa.g.c28071.2 Carica papaya
Cpa.g.c30633.2 Carica papaya
Cpa.g.sc130.26 Carica papaya
Cpa.g.sc130.27 Carica papaya
Cpa.g.sc171.39 Carica papaya
Cre04.g214100 Chlamydomonas reinhardtii
CsaV3_5G027220 Cucumis sativus L.
CSS0002021 Camellia sinensis var. sinensis
CSS0031267 Camellia sinensis var. sinensis
DCAR_011246 Daucus carota
Dinv33456 Davidia involucrata
Dinv33459 Davidia involucrata
Dinv35097 Davidia involucrata
Duzib187G0244 Durio zibethinus
ECA246G2600 Erigeron canadensis
EL10Ac2g02464 Beta vulgaris
EL10Ac5g10908 Beta vulgaris
EL10Ac6g13785 Beta vulgaris
Eucgr.J02232 Eucalyptus grandis
FAN05G5577 Fragaria x ananassa
FAN11G2673 Fragaria x ananassa
FAN14G1378 Fragaria x ananassa
FAN21G0797 Fragaria x ananassa
FvH4_3g28470 Fragaria vesca
FvH4_6g51400 Fragaria vesca
Glyma.05G004900 Glycine max
Glyma.17G203751 Glycine max
Glyma.19G005502 Glycine max
Gohir.A07G222400 Gossypium hirsutum
Gohir.D07G229100 Gossypium hirsutum
Gorai.001G264200 Gossypium raimondii
GSVIVG01032428001 Vitis vinifera
HanXRQChr17g0548351 Helianthus annuus
Haze_14718 Corylus avellana
Hma1.2p1_1291F.1_g273570 Hydrangea macrophylla
Hund03875 Selenicereus undatus
Hund04415 Selenicereus undatus
Lj2g0004707 Lotus japonicus
Manes.17G115200 Manihot esculenta
Mapoly0034s0026 Marchantia polymorpha
MBI16_g14596_MAGBIO Magnolia biondii
MCO08G118 Micromonas commoda
MD09G1028700 Malus domestica
MD17G1030300 Malus domestica
Medtr6g005390 Medicago truncatula
Medtr6g005400 Medicago truncatula
Medtr6g005410 Medicago truncatula
MELO3C021568.2 Cucumis melo
Migut.H00088 Erythranthe guttata
MSTRG.15523 Avicennia marina
MSTRG.3153 Avicennia marina
Nitab4.5_0002682g0020 Nicotiana tabacum
Nitab4.5_0005432g0010 Nicotiana tabacum
Nn3g16771 Nelumbo nucifera
Oeu057055.1 Olea europaea
Os02g0296800 Oryza sativa ssp. japonica
Peaxi162Scf00129g01422 Petunia axillaris
Peaxi162Scf00304g01217 Petunia axillaris
PGR024G0002 Punica granatum
PGR142G3360 Punica granatum
PGSC0003DMG400000477 Solanum tuberosum
Phvul.004G010800 Phaseolus vulgaris
Potri.001G178800 Populus trichocarpa
Pp3c16_750 Physcomitrium patens
Pp3c3_11190 Physcomitrium patens
PRCOL_00003784 Prasinoderma coloniale
PRCOL_00005828 Prasinoderma coloniale
Prupe.3G207400 Prunus persica
Prupe.3G289500 Prunus persica
Prupe.3G289700 Prunus persica
Psat1g058360 Pisum sativum
Psat1g058400 Pisum sativum
Psat1g190920 Pisum sativum
QL02p075210 Quercus lobata
QL09p000526 Quercus lobata
RcHm_v2.0_Chr1g0351301 Rosa chinensis
RcHm_v2.0_Chr2g0173081 Rosa chinensis
RcHm_v2.0_Chr7g0219921 Rosa chinensis
RcHm_v2.0_Chr7g0228061 Rosa chinensis
RcHm_v2.0_Chr7g0228091 Rosa chinensis
Rhsim02G0095200 Rhododendron simsii
Rhsim09G0149800 Rhododendron simsii
Sabra01G0148000 Salix brachista
SalBow1G7073 Salvia bowleyana
Sc19g0005880 Simmondsia chinensis
Sed0010591 Sechium edule
Sed0025592 Sechium edule
SEGI_02514 Sequoiadendron giganteum
SGA_v2.0_scaffold481G52321 Striga asiatica
SHI25748 Sapria himalayana
SMO356G0462 Selaginella moellendorffii
Solyc02g086560.3 Solanum lycopersicum
Sopen02g031300 Solanum pennellii
Sp1g37040 Schrenkiella parvula
TAR629G2348 Trochodendron aralioides
THA.LOC104801894 Tarenaya hassleriana
THA.LOC104807109 Tarenaya hassleriana
Thecc.04G015200 Theobroma cacao
Thhalv10011756m.g Eutrema salsugineum
TPR.G14069 Trifolium pratense
TWI12G0687 Tripterygium wilfordii
unitig_746.g26550 Utricularia gibba
vmacro04855 Vaccinium macrocarpon
VMungo0464G0237 Vigna mungo
Zm00001eb072570 Zea mays
Zm00001eb085260 Zea mays

User provided reference genes

Program Settings