Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p00290 Brassica napus
A07p26240 Brassica napus
Aa31LG10G16940 Aethionema arabicum
Actinidia00740 Actinidia chinensis
Ah.08g213000 Amaranthus hybridus
Ah.15g091740 Amaranthus hybridus
AL5G45930 Arabidopsis lyrata
Aqoxy2G03259 Aquilegia oxysepala
AT3G63095 Arabidopsis thaliana
ATR0626G310 Amborella trichopoda
Atru.chr5.1383 Acer truncatum
BolC4t24544H Brassica oleracea
BolC6t38030H Brassica oleracea
BraA04t15748Z Brassica rapa
BraA07t30267Z Brassica rapa
C04p30120 Brassica napus
C06p28620 Brassica napus
CAN.G609.9 Capsicum annuum
CANSAT25G0479 Cannabis sativa
CARHR173410 Cardamine hirsuta
Carub.0005s2976 Capsella rubella
Ca_08572_v3 Cicer arietinum L.
Ca_09769_v3 Cicer arietinum L.
Cc01_g19710 Coffea canephora
Cfa006114 Carpinus fangiana
Ciclev10024447m.g Citrus clementina
CiPaw.07G093600 Carya illinoinensis
CiPaw.08G103900 Carya illinoinensis
ClCG07G000210 Citrullus lanatus
COL.COLO4_03337 Corchorus olitorius
COL.COLO4_09131 Corchorus olitorius
Cpa.g.sc52.6 Carica papaya
Cpa.g.sc64.166 Carica papaya
CsaV3_7G028640 Cucumis sativus L.
CSS0035012 Camellia sinensis var. sinensis
DCAR_002746 Daucus carota
DCAR_018411 Daucus carota
Dinv11251 Davidia involucrata
Dinv32955 Davidia involucrata
Duzib138G1054 Durio zibethinus
ECA236G2709 Erigeron canadensis
ECA247G2094 Erigeron canadensis
Eucgr.K03387 Eucalyptus grandis
FAN15G0349 Fragaria x ananassa
FAN15G1538 Fragaria x ananassa
FAN20G2888 Fragaria x ananassa
FAN24G3244 Fragaria x ananassa
FAN27G1844 Fragaria x ananassa
FvH4_2g23841 Fragaria vesca
Glyma.02G148700 Glycine max
Glyma.03G151700 Glycine max
Glyma.10G025200 Glycine max
Glyma.19G154300 Glycine max
Gohir.A08G069200 Gossypium hirsutum
Gohir.A08G069300 Gossypium hirsutum
Gohir.A11G121400 Gossypium hirsutum
Gohir.A12G005800 Gossypium hirsutum
Gohir.D08G077500 Gossypium hirsutum
Gohir.D08G077600 Gossypium hirsutum
Gohir.D11G126500 Gossypium hirsutum
Gohir.D12G005300 Gossypium hirsutum
Gorai.004G082400 Gossypium raimondii
Gorai.004G082500 Gossypium raimondii
Gorai.007G135300 Gossypium raimondii
Gorai.008G005200 Gossypium raimondii
Gorai.009G014800 Gossypium raimondii
GSVIVG01011106001 Vitis vinifera
HanXRQChr15g0466391 Helianthus annuus
Haze_04736 Corylus avellana
Hma1.2p1_0628F.1_g191965 Hydrangea macrophylla
Lalb_Chr01g0020211 Lupinus albus
Lalb_Chr21g0306521 Lupinus albus
Lalb_Chr25g0290231 Lupinus albus
Lj1g0021337 Lotus japonicus
Lj5g0012316 Lotus japonicus
Lsat_1_v5_gn_1_29921 Lactuca sativa
Manes.01G209200 Manihot esculenta
Manes.01G209300 Manihot esculenta
Manes.05G074000 Manihot esculenta
Manes.05G074200 Manihot esculenta
MD03G1268100 Malus domestica
Medtr1g032050 Medicago truncatula
Medtr1g032400 Medicago truncatula
Medtr7g094650 Medicago truncatula
MELO3C015854.2 Cucumis melo
Migut.D00272 Erythranthe guttata
Migut.N02158 Erythranthe guttata
MSTRG.18220 Avicennia marina
MSTRG.21570 Avicennia marina
Nitab4.5_0001028g0210 Nicotiana tabacum
Nitab4.5_0002386g0020 Nicotiana tabacum
Nn1g02158 Nelumbo nucifera
Nn3g17864 Nelumbo nucifera
Nn4g26188 Nelumbo nucifera
Oeu015958.1 Olea europaea
Oeu028081.1 Olea europaea
Os03g0357500 Oryza sativa ssp. japonica
Os07g0655800 Oryza sativa ssp. japonica
Peaxi162Scf00570g00049 Petunia axillaris
PGR044G1538 Punica granatum
PGSC0003DMG400020123 Solanum tuberosum
Phvul.001G149300 Phaseolus vulgaris
Phvul.007G170000 Phaseolus vulgaris
Potri.002G215200 Populus trichocarpa
Potri.004G022700 Populus trichocarpa
Potri.014G139100 Populus trichocarpa
Potri.014G139200 Populus trichocarpa
Prupe.8G243700 Prunus persica
Psat3g065120 Pisum sativum
Psat6g061040 Pisum sativum
PSO210G2426 Papaver somniferum
PSO210G7214 Papaver somniferum
PSO447G0321 Papaver somniferum
PSO832G0665 Papaver somniferum
QL12p022365 Quercus lobata
RcHm_v2.0_Chr6g0291441 Rosa chinensis
Rhsim13G0023300 Rhododendron simsii
Sabra02G0167400 Salix brachista
Sabra14G0104900 Salix brachista
SalBow4G1980 Salvia bowleyana
SalBow6G3683 Salvia bowleyana
Sc05g0004870 Simmondsia chinensis
Sc24g0004150 Simmondsia chinensis
Sed0002169 Sechium edule
Sed0008634 Sechium edule
Sed0008870 Sechium edule
SGA_v2.0_scaffold11G05800 Striga asiatica
SGA_v2.0_scaffold258G45766 Striga asiatica
SGA_v2.0_scaffold80G25940 Striga asiatica
Solyc09g064900.1 Solanum lycopersicum
Sopen02g023170 Solanum pennellii
Sopen09g026600 Solanum pennellii
TAR636G3147 Trochodendron aralioides
THA.LOC104802228 Tarenaya hassleriana
THA.LOC104817549 Tarenaya hassleriana
Thecc.01G282700 Theobroma cacao
TPR.G1598 Trifolium pratense
TWI59G0379 Tripterygium wilfordii
TWI59G1208 Tripterygium wilfordii
unitig_8.g3720 Utricularia gibba
VMungo0720G0860 Vigna mungo
VMungo1383G3409 Vigna mungo
Zm00001eb017420 Zea mays
Zm00001eb329500 Zea mays
Zm00001eb394420 Zea mays

User provided reference genes

Program Settings