Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p13630 Brassica napus
A03p53390 Brassica napus
Aa31LG6G4370 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.415 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2521 Anthoceros agrestis
Actinidia26877 Actinidia chinensis
Ah.09g234400 Amaranthus hybridus
AL7G31370 Arabidopsis lyrata
Aqoxy1G04164 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8PRB68 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E0HWS1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E5J967 Arachis hypogaea
AT4G22260 Arabidopsis thaliana
ATR1128G104 Amborella trichopoda
Atru.chr10.2310 Acer truncatum
AUR62012769 Chenopodium quinoa
AUR62021889 Chenopodium quinoa
BcaC09g51146 Brassica carinata
BcaNung03749 Brassica carinata
BolC1t01601H Brassica oleracea
BolC7t45661H Brassica oleracea
BraA01t01306Z Brassica rapa
BraA03t14406Z Brassica rapa
C01p16510 Brassica napus
C07p51700 Brassica napus
CAN.G1186.9 Capsicum annuum
CANSAT56G2407 Cannabis sativa
CARHR229150 Cardamine hirsuta
Carub.0007s1906 Capsella rubella
Ca_00707_v3 Cicer arietinum L.
CBR_g12323 Chara braunii
CBR_g16017 Chara braunii
Cc09_g01070 Coffea canephora
CDE04G3552 Ceratophyllum demersum
Cfa000134 Carpinus fangiana
Ciclev10015546m.g Citrus clementina
CiPaw.09G100100 Carya illinoinensis
ClCG01G009770 Citrullus lanatus
COL.COLO4_31852 Corchorus olitorius
Cpa.g.sc152.62 Carica papaya
Cre03.g172500 Chlamydomonas reinhardtii
Cre07.g350750 Chlamydomonas reinhardtii
CsaV3_1G045890 Cucumis sativus L.
CSS0003829 Camellia sinensis var. sinensis
DCAR_004870 Daucus carota
Dinv13952 Davidia involucrata
Dinv20117 Davidia involucrata
Duzib160G0919 Durio zibethinus
Duzib235G1273 Durio zibethinus
EL10Ac8g20147 Beta vulgaris
Eucgr.E03960 Eucalyptus grandis
Eucgr.E03965 Eucalyptus grandis
Eucgr.E03967 Eucalyptus grandis
FAN21G2340 Fragaria x ananassa
FAN21G2852 Fragaria x ananassa
FAN25G2381 Fragaria x ananassa
FvH4_3g01250 Fragaria vesca
Glyma.09G008500 Glycine max
Glyma.15G112900 Glycine max
Gohir.A05G173800 Gossypium hirsutum
Gohir.D05G176800 Gossypium hirsutum
Gorai.009G182200 Gossypium raimondii
GSVIVG01006689001 Vitis vinifera
GSVIVG01007272001 Vitis vinifera
HanXRQChr05g0129171 Helianthus annuus
Haze_06890 Corylus avellana
Hma1.2p1_0298F.1_g117340 Hydrangea macrophylla
Hma1.2p1_0660F.1_g197450 Hydrangea macrophylla
Hma1.2p1_2753F.1_g327930 Hydrangea macrophylla
HPP92_004744 Vanilla planifolia
HPP92_004745 Vanilla planifolia
Hund21443 Selenicereus undatus
Lalb_Chr15g0087861 Lupinus albus
Lj1A1237T47 Lonicera japonica
Lj3g0010948 Lotus japonicus
Lj6g0018145 Lotus japonicus
Lsat_1_v5_gn_7_14460 Lactuca sativa
Manes.16G002000 Manihot esculenta
Mapoly0003s0157 Marchantia polymorpha
Mapoly0050s0020 Marchantia polymorpha
MBI16_g26179_MAGBIO Magnolia biondii
MCO02G133 Micromonas commoda
MCO02G403 Micromonas commoda
MD05G1354300 Malus domestica
MD10G1328600 Malus domestica
Medtr2g025140 Medicago truncatula
MELO3C021708.2 Cucumis melo
MELO3C021713.2 Cucumis melo
Migut.M01360 Erythranthe guttata
MSTRG.16005 Avicennia marina
Nitab4.5_0000143g0540 Nicotiana tabacum
Nitab4.5_0001198g0240 Nicotiana tabacum
Nn1g03357 Nelumbo nucifera
Oeu002752.3 Olea europaea
Os03g0847500 Oryza sativa ssp. japonica
Os04g0668900 Oryza sativa ssp. japonica
Peaxi162Scf00063g00213 Petunia axillaris
PGR042G2916 Punica granatum
PGSC0003DMG400013335 Solanum tuberosum
Phvul.006G144800 Phaseolus vulgaris
Potri.004G002600 Populus trichocarpa
Potri.011G021800 Populus trichocarpa
Pp3c1_30120 Physcomitrium patens
Pp3c27_6780 Physcomitrium patens
Pp3c2_11230 Physcomitrium patens
PRCOL_00003826 Prasinoderma coloniale
PRCOL_00006496 Prasinoderma coloniale
PRCOL_00006497 Prasinoderma coloniale
Prupe.4G013400 Prunus persica
Psat1g177440 Pisum sativum
PSO210G5061 Papaver somniferum
PSO675G3403 Papaver somniferum
PSO832G1336 Papaver somniferum
QL03p008204 Quercus lobata
QL03p008214 Quercus lobata
QL05p070074 Quercus lobata
RcHm_v2.0_Chr5g0001781 Rosa chinensis
Rhsim13G0148600 Rhododendron simsii
Sabra04G0001100 Salix brachista
Sabra11G0011400 Salix brachista
Sabra11G0013200 Salix brachista
SalBow8G4341 Salvia bowleyana
Sc05g0009510 Simmondsia chinensis
Sed0020812 Sechium edule
SEGI_01990 Sequoiadendron giganteum
SEGI_26802 Sequoiadendron giganteum
SGA_v2.0_scaffold7G03794 Striga asiatica
SMO147G0375 Selaginella moellendorffii
SMO200G0146 Selaginella moellendorffii
Solyc11g011990.2 Solanum lycopersicum
Sopen11g006800 Solanum pennellii
Sp7g20380 Schrenkiella parvula
TAR624G0457 Trochodendron aralioides
TAR626G1813 Trochodendron aralioides
THA.LOC104812984 Tarenaya hassleriana
Thecc.06G230100 Theobroma cacao
Thhalv10025624m.g Eutrema salsugineum
TPR.G13024 Trifolium pratense
TWI38G1933 Tripterygium wilfordii
TWI63G1683 Tripterygium wilfordii
unitig_748.g7945 Utricularia gibba
vmacro03656 Vaccinium macrocarpon
VMungo0540G1825 Vigna mungo
Zm00001eb066910 Zea mays
Zm00001eb066920 Zea mays

User provided reference genes

Program Settings