Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p06300 Brassica napus
A10p07300 Brassica napus
Aa31LG6G9210 Aethionema arabicum
Actinidia29457 Actinidia chinensis
Ah.10g032020 Amaranthus hybridus
AL1G52500 Arabidopsis lyrata
Aqoxy6G00176 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.032V6W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3YB7R6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9F26EH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PAU1NR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RE5YQ2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S56SQA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U3SFN6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W2W6PZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z8FB5F Arachis hypogaea
AT1G44835 Arabidopsis thaliana
ATR0193G024 Amborella trichopoda
Atru.chr13.1416 Acer truncatum
AUR62018164 Chenopodium quinoa
AUR62042433 Chenopodium quinoa
BcaB04g17581 Brassica carinata
BcaC07g37283 Brassica carinata
BcaC08g42881 Brassica carinata
BolC6t35233H Brassica oleracea
BolC8t47557H Brassica oleracea
BraA08t32633Z Brassica rapa
BraSC36t46091Z Brassica rapa
C06p00970 Brassica napus
C08p07120 Brassica napus
CAN.G1396.5 Capsicum annuum
CANSAT25G0921 Cannabis sativa
CARHR036100 Cardamine hirsuta
Carub.0001s3538 Capsella rubella
Ca_03754_v3 Cicer arietinum L.
Ca_03755_v3 Cicer arietinum L.
Ca_13578_v3 Cicer arietinum L.
Cc01_g07610 Coffea canephora
CDE05G2191 Ceratophyllum demersum
Cfa010764 Carpinus fangiana
Cfa015995 Carpinus fangiana
Ciclev10001813m.g Citrus clementina
CiPaw.05G223800 Carya illinoinensis
CiPaw.05G223900 Carya illinoinensis
ClCG11G015640 Citrullus lanatus
COL.COLO4_12205 Corchorus olitorius
Cpa.g.sc36.39 Carica papaya
Cre10.g425950 Chlamydomonas reinhardtii
CsaV3_4G028370 Cucumis sativus L.
CSS0047682 Camellia sinensis var. sinensis
CSS0048949 Camellia sinensis var. sinensis
DCAR_017401 Daucus carota
Dinv40398 Davidia involucrata
Duzib041G0272 Durio zibethinus
Duzib093G0119 Durio zibethinus
Duzib116G0013 Durio zibethinus
ECA232G2439 Erigeron canadensis
EL10Ac2g03105 Beta vulgaris
Eucgr.H00450 Eucalyptus grandis
Eucgr.L02995 Eucalyptus grandis
FAN15G0922 Fragaria x ananassa
FAN20G0512 Fragaria x ananassa
FAN20G1758 Fragaria x ananassa
FAN24G0526 Fragaria x ananassa
FAN24G2292 Fragaria x ananassa
FAN27G1282 Fragaria x ananassa
FvH4_2g26610 Fragaria vesca
Glyma.04G251502 Glycine max
Glyma.06G111200 Glycine max
Glyma.14G147200 Glycine max
Gohir.A02G073700 Gossypium hirsutum
Gohir.A05G233700 Gossypium hirsutum
Gohir.D02G080900 Gossypium hirsutum
Gohir.D05G236100 Gossypium hirsutum
Gorai.005G090400 Gossypium raimondii
Gorai.009G244400 Gossypium raimondii
GSVIVG01008896001 Vitis vinifera
HanXRQChr02g0041151 Helianthus annuus
Haze_00470 Corylus avellana
Haze_00471 Corylus avellana
HPP92_001042 Vanilla planifolia
HPP92_029041 Vanilla planifolia
Hund16845 Selenicereus undatus
Hund24749 Selenicereus undatus
Lalb_Chr08g0241531 Lupinus albus
Lalb_Chr17g0343851 Lupinus albus
Lj1g0014313 Lotus japonicus
Lj5g0013947 Lotus japonicus
Lj7A337T25 Lonicera japonica
Lsat_1_v5_gn_4_135460 Lactuca sativa
Manes.02G161600 Manihot esculenta
Mapoly0010s0001 Marchantia polymorpha
MBI03_g33021_MAGBIO Magnolia biondii
MBI04_g30787_MAGBIO Magnolia biondii
MD08G1166300 Malus domestica
MD15G1352500 Malus domestica
Medtr3g072620 Medicago truncatula
Medtr5g058520 Medicago truncatula
MELO3C032634.2 Cucumis melo
Migut.C01145 Erythranthe guttata
MSTRG.1457 Avicennia marina
Nitab4.5_0000633g0140 Nicotiana tabacum
Nitab4.5_0008211g0030 Nicotiana tabacum
Nn5g28198 Nelumbo nucifera
Oeu047941.1 Olea europaea
Oeu059427.1 Olea europaea
Os02g0767700 Oryza sativa ssp. japonica
Peaxi162Scf00051g00623 Petunia axillaris
PGR044G1014 Punica granatum
PGSC0003DMG400017574 Solanum tuberosum
Phvul.009G123200 Phaseolus vulgaris
Potri.002G085700 Populus trichocarpa
Potri.005G175900 Populus trichocarpa
Pp3c18_22250 Physcomitrium patens
PRCOL_00005180 Prasinoderma coloniale
Prupe.1G501000 Prunus persica
Psat2g085920 Pisum sativum
Psat5g120840 Pisum sativum
PSO170G4538 Papaver somniferum
PSO782G4297 Papaver somniferum
QL09p035644 Quercus lobata
RcHm_v2.0_Chr6g0295461 Rosa chinensis
RhsimUnG0094500 Rhododendron simsii
Sabra02G0067100 Salix brachista
Sabra05G0132500 Salix brachista
SalBow7G2597 Salvia bowleyana
Sc01g0001280 Simmondsia chinensis
Sc01g0001320 Simmondsia chinensis
Sed0012589 Sechium edule
SEGI_02373 Sequoiadendron giganteum
SEGI_30371 Sequoiadendron giganteum
SGA_v2.0_scaffold52G18977 Striga asiatica
Solyc06g060420.3 Solanum lycopersicum
Sopen06g020560 Solanum pennellii
Sp1g33700 Schrenkiella parvula
TAR381G1686 Trochodendron aralioides
THA.LOC104806814 Tarenaya hassleriana
Thecc.08G122000 Theobroma cacao
Thhalv10004660m.g Eutrema salsugineum
Thhalv10021201m.g Eutrema salsugineum
TPR.G22992 Trifolium pratense
TWI56G0960 Tripterygium wilfordii
unitig_82.g26987 Utricularia gibba
vmacro00818 Vaccinium macrocarpon
VMungo1309G0682 Vigna mungo
Zm00001eb193560 Zea mays

User provided reference genes

Program Settings