Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p44260 Brassica napus
A07p06800 Brassica napus
Aa31sc733G10 Aethionema arabicum
Actinidia12354 Actinidia chinensis
Actinidia12355 Actinidia chinensis
Actinidia12356 Actinidia chinensis
Actinidia20605 Actinidia chinensis
Actinidia20619 Actinidia chinensis
Actinidia24709 Actinidia chinensis
Ah.10g032550 Amaranthus hybridus
AL3G41930 Arabidopsis lyrata
Aqoxy1G04295 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AZD9M5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CJRH42 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DEY0FQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DUBF95 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PMM024 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U10BM9 Arachis hypogaea
AT2G04235 Arabidopsis thaliana
ATR0751G269 Amborella trichopoda
Atru.chr6.3433 Acer truncatum
AUR62018228 Chenopodium quinoa
AUR62037747 Chenopodium quinoa
BcaB06g26770 Brassica carinata
BcaC06g35856 Brassica carinata
BolC7t41487H Brassica oleracea
BraA03t13556Z Brassica rapa
BraA07t28471Z Brassica rapa
C07p10370 Brassica napus
CANSAT11G0838 Cannabis sativa
CANSAT64G2466 Cannabis sativa
Carub.0003s2593 Capsella rubella
Ca_16333_v3 Cicer arietinum L.
Ca_30417_v3 Cicer arietinum L.
Cc05_g01980 Coffea canephora
CDE01G0402 Ceratophyllum demersum
CDE02G3322 Ceratophyllum demersum
Cfa014199 Carpinus fangiana
Ciclev10014049m.g Citrus clementina
CiPaw.03G284100 Carya illinoinensis
ClCG02G003060 Citrullus lanatus
COL.COLO4_19656 Corchorus olitorius
Cpa.g.c43179 Carica papaya
Cpa.g.sc136.57 Carica papaya
Cpa.g.sc136.58 Carica papaya
CsaV3_7G002340 Cucumis sativus L.
CSS0016995 Camellia sinensis var. sinensis
CSS0020778 Camellia sinensis var. sinensis
DCAR_012742 Daucus carota
DCAR_030665 Daucus carota
Dinv05326 Davidia involucrata
Dinv21324 Davidia involucrata
Duzib138G0034 Durio zibethinus
Duzib211G0583 Durio zibethinus
ECA240G3070 Erigeron canadensis
ECA240G4228 Erigeron canadensis
EL10Ac2g03228 Beta vulgaris
Eucgr.A01375 Eucalyptus grandis
FAN02G4474 Fragaria x ananassa
FAN05G5461 Fragaria x ananassa
FAN09G0598 Fragaria x ananassa
FAN14G5634 Fragaria x ananassa
FvH4_6g40370 Fragaria vesca
Glyma.07G011650 Glycine max
Glyma.13G008500 Glycine max
Glyma.20G060900 Glycine max
Glyma.20G061000 Glycine max
Gohir.A08G049000 Gossypium hirsutum
Gohir.A11G147450 Gossypium hirsutum
Gohir.A11G147500 Gossypium hirsutum
Gohir.D08G059000 Gossypium hirsutum
Gohir.D11G154350 Gossypium hirsutum
Gohir.D11G154400 Gossypium hirsutum
Gorai.004G060900 Gossypium raimondii
Gorai.007G164500 Gossypium raimondii
GSVIVG01030128001 Vitis vinifera
HanXRQChr09g0257391 Helianthus annuus
HanXRQChr13g0389891 Helianthus annuus
Haze_12584 Corylus avellana
Hma1.2p1_0629F.1_g192120 Hydrangea macrophylla
Hma1.2p1_0629F.1_g192130 Hydrangea macrophylla
HPP92_000125 Vanilla planifolia
Hund13065 Selenicereus undatus
Lalb_Chr10g0094191 Lupinus albus
Lj1C801G5 Lonicera japonica
Lj6g0011858 Lotus japonicus
Lsat_1_v5_gn_7_97220 Lactuca sativa
Lsat_1_v5_gn_9_102901 Lactuca sativa
Manes.12G067100 Manihot esculenta
MBI14_g33664_MAGBIO Magnolia biondii
MBI14_g37363_MAGBIO Magnolia biondii
MD09G1131900 Malus domestica
MD09G1132300 Malus domestica
MD09G1132400 Malus domestica
MD17G1119600 Malus domestica
MELO3C024178.2 Cucumis melo
Migut.M00063 Erythranthe guttata
Nitab4.5_0003086g0060 Nicotiana tabacum
Nitab4.5_0004941g0030 Nicotiana tabacum
Nn1g07734 Nelumbo nucifera
Oeu004281.1 Olea europaea
Oeu036991.1 Olea europaea
Oeu056856.1 Olea europaea
Os06g0608100 Oryza sativa ssp. japonica
Peaxi162Scf00359g00324 Petunia axillaris
PGR083G1863 Punica granatum
PGSC0003DMG400017412 Solanum tuberosum
Phvul.006G005000 Phaseolus vulgaris
Potri.001G315950 Populus trichocarpa
Prupe.3G194100 Prunus persica
Psat5g105360 Pisum sativum
PSO017G5154 Papaver somniferum
PSO478G0307 Papaver somniferum
PSO478G2888 Papaver somniferum
PSO541G4744 Papaver somniferum
PSO675G6191 Papaver somniferum
QL04p066976 Quercus lobata
RcHm_v2.0_Chr2g0155571 Rosa chinensis
Rhsim06G0179100 Rhododendron simsii
Sabra16G0199800 Salix brachista
SalBow7G0294 Salvia bowleyana
SalBow7G0566 Salvia bowleyana
Sc20g0003130 Simmondsia chinensis
Sed0008164 Sechium edule
Sed0010628 Sechium edule
SEGI_11604 Sequoiadendron giganteum
SEGI_14020 Sequoiadendron giganteum
SEGI_15711 Sequoiadendron giganteum
SEGI_34464 Sequoiadendron giganteum
SGA_v2.0_scaffold181G39698 Striga asiatica
Solyc07g045170.3 Solanum lycopersicum
Sopen07g023720 Solanum pennellii
Sp3g23130 Schrenkiella parvula
TAR627G0484 Trochodendron aralioides
TAR627G0657 Trochodendron aralioides
THA.LOC104815372 Tarenaya hassleriana
Thecc.01G199700 Theobroma cacao
Thhalv10002382m.g Eutrema salsugineum
TPR.G27424 Trifolium pratense
TPR.G30970 Trifolium pratense
TWI36G0325 Tripterygium wilfordii
unitig_37.g12589 Utricularia gibba
vmacro12061 Vaccinium macrocarpon
VMungo0331G1557 Vigna mungo
VMungo0540G0527 Vigna mungo
Zm00001eb386590 Zea mays

User provided reference genes

Program Settings