Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p11710 Brassica napus
Aa31LG9G16850 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2160 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2165 Anthoceros agrestis
Actinidia18094 Actinidia chinensis
Actinidia36275 Actinidia chinensis
Ah.16g100870 Amaranthus hybridus
AL4G16760 Arabidopsis lyrata
AL7G51600 Arabidopsis lyrata
Aqoxy3G03767 Aquilegia oxysepala
Aqoxy4G00949 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.134PWN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3DLK77 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5GV78D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.66GFWV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.87D3N1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ASZ0YV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KW7YJP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NM7AU0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QEN3W4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SXY0US Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X5BDW5 Arachis hypogaea
AT5G38840 Arabidopsis thaliana
ATR0691G089 Amborella trichopoda
AUR62009453 Chenopodium quinoa
AUR62023134 Chenopodium quinoa
BcaB06g27252 Brassica carinata
BcaC02g09673 Brassica carinata
BolC1t04235H Brassica oleracea
BolC4t26124H Brassica oleracea
BraA04t16838Z Brassica rapa
C01p42870 Brassica napus
C04p45420 Brassica napus
CAN.G497.45 Capsicum annuum
CANSAT64G0674 Cannabis sativa
CANSAT64G2264 Cannabis sativa
CARHR263780 Cardamine hirsuta
Carub.0007s3703 Capsella rubella
Ca_06959_v3 Cicer arietinum L.
CBR_g66794 Chara braunii
Cc07_g04630 Coffea canephora
CDE02G1515 Ceratophyllum demersum
Cfa007711 Carpinus fangiana
Ciclev10011153m.g Citrus clementina
CiPaw.03G081400 Carya illinoinensis
ClCG07G016130 Citrullus lanatus
COL.COLO4_00229 Corchorus olitorius
Cpa.g.sc14.254 Carica papaya
Cre03.g152450 Chlamydomonas reinhardtii
CsaV3_4G009930 Cucumis sativus L.
CSS0017694 Camellia sinensis var. sinensis
CSS0024263 Camellia sinensis var. sinensis
DCAR_007542 Daucus carota
Dinv34895 Davidia involucrata
ECA246G1099 Erigeron canadensis
EL10Ac2g04408 Beta vulgaris
Eucgr.I02082 Eucalyptus grandis
FAN02G2580 Fragaria x ananassa
FAN05G2711 Fragaria x ananassa
FAN05G5078 Fragaria x ananassa
FAN09G2425 Fragaria x ananassa
FAN14G0859 Fragaria x ananassa
FAN14G1739 Fragaria x ananassa
FAN14G5249 Fragaria x ananassa
FvH4_6g45871 Fragaria vesca
FvH4_6g46110 Fragaria vesca
Glyma.08G253900 Glycine max
Glyma.18G276300 Glycine max
Gohir.A07G178500 Gossypium hirsutum
Gohir.D01G107700 Gossypium hirsutum
Gohir.D06G077800 Gossypium hirsutum
Gohir.D06G120200 Gossypium hirsutum
Gohir.D07G185600 Gossypium hirsutum
Gohir.D11G266900 Gossypium hirsutum
Gorai.001G206200 Gossypium raimondii
GSVIVG01036517001 Vitis vinifera
HanXRQChr12g0380201 Helianthus annuus
Hma1.2p1_0588F.1_g184650 Hydrangea macrophylla
Hma1.2p1_2186F.1_g316386 Hydrangea macrophylla
Hma1.2p1_2186F.1_g316390 Hydrangea macrophylla
Hma1.2p1_2186F.1_g316400 Hydrangea macrophylla
HPP92_019180 Vanilla planifolia
Hund16252 Selenicereus undatus
Lalb_Chr10g0092611 Lupinus albus
Lj1g0005667 Lotus japonicus
Lj4A126T71 Lonicera japonica
Lsat_1_v5_gn_3_95261 Lactuca sativa
Manes.01G104800 Manihot esculenta
Mapoly0045s0050 Marchantia polymorpha
MD09G1076900 Malus domestica
Medtr7g017500 Medicago truncatula
MELO3C018906.2 Cucumis melo
Migut.H00575 Erythranthe guttata
MSTRG.2967 Avicennia marina
Nitab4.5_0002171g0080 Nicotiana tabacum
Nitab4.5_0002978g0100 Nicotiana tabacum
Nn4g23569 Nelumbo nucifera
Oeu062190.2 Olea europaea
Os06g0275900 Oryza sativa ssp. japonica
Peaxi162Scf00020g02131 Petunia axillaris
PGR004G2610 Punica granatum
PGSC0003DMG400001473 Solanum tuberosum
Phvul.008G024500 Phaseolus vulgaris
Potri.004G111500 Populus trichocarpa
Pp3c14_10960 Physcomitrium patens
PRCOL_00001445 Prasinoderma coloniale
Prupe.3G247200 Prunus persica
Psat3g194480 Pisum sativum
PSO063G4379 Papaver somniferum
PSO339G2512 Papaver somniferum
PSO782G1791 Papaver somniferum
QL02p064873 Quercus lobata
QL02p064885 Quercus lobata
RcHm_v2.0_Chr2g0164301 Rosa chinensis
RcHm_v2.0_Chr2g0164311 Rosa chinensis
RcHm_v2.0_Chr2g0164321 Rosa chinensis
RcHm_v2.0_Chr2g0164441 Rosa chinensis
RcHm_v2.0_Chr2g0164481 Rosa chinensis
RcHm_v2.0_Chr3g0478401 Rosa chinensis
Rhsim10G0060500 Rhododendron simsii
Sabra04G0072900 Salix brachista
Sc11g0008940 Simmondsia chinensis
Sed0018763 Sechium edule
SEGI_00884 Sequoiadendron giganteum
SEGI_21333 Sequoiadendron giganteum
SEGI_33338 Sequoiadendron giganteum
SGA_v2.0_scaffold52G19060 Striga asiatica
SHI25847 Sapria himalayana
SHI25849 Sapria himalayana
Solyc02g089360.4 Solanum lycopersicum
Sopen02g034140 Solanum pennellii
Sp7g03070 Schrenkiella parvula
TAR629G3016 Trochodendron aralioides
THA.LOC104805534 Tarenaya hassleriana
Thecc.04G110100 Theobroma cacao
Thecc.10G108100 Theobroma cacao
Thhalv10027659m.g Eutrema salsugineum
TPR.G3272 Trifolium pratense
TWI34G1112 Tripterygium wilfordii
unitig_899.g15113 Utricularia gibba
vmacro05605 Vaccinium macrocarpon
vmacro17105 Vaccinium macrocarpon
vmacro23470 Vaccinium macrocarpon
VMungo1080G0922 Vigna mungo
VMungo1383G1046 Vigna mungo
Zm00001eb380550 Zea mays

User provided reference genes

Program Settings