Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p44490 Brassica napus
A10p23980 Brassica napus
Aa31LG11G14770 Aethionema arabicum
Aa31LG5G10650 Aethionema arabicum
Actinidia36094 Actinidia chinensis
Ah.03g141220 Amaranthus hybridus
Ah.05g173110 Amaranthus hybridus
AL3G10640 Arabidopsis lyrata
AL6G25460 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.HH7AL9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SA5TEJ Arachis hypogaea
AT3G01516 Arabidopsis thaliana
AT5G14690 Arabidopsis thaliana
ATR0730G202 Amborella trichopoda
Atru.chr6.2317 Acer truncatum
AUR62013741 Chenopodium quinoa
AUR62023410 Chenopodium quinoa
BcaC03g13455 Brassica carinata
BcaC04g22405 Brassica carinata
BcaC05g30410 Brassica carinata
BcaC05g30449 Brassica carinata
BcaC08g44071 Brassica carinata
BcaNung03104 Brassica carinata
BolC2t06654H Brassica oleracea
BolC5t35156H Brassica oleracea
BolC9t59083H Brassica oleracea
BraA02t05235Z Brassica rapa
BraA05t23207Z Brassica rapa
BraA10t44462Z Brassica rapa
C02p07220 Brassica napus
C09p19720 Brassica napus
C09p62450 Brassica napus
C09p75080 Brassica napus
CANSAT64G1588 Cannabis sativa
CARHR075420 Cardamine hirsuta
CARHR198620 Cardamine hirsuta
Carub.0003s0056 Capsella rubella
Carub.0006s1286 Capsella rubella
Cc07_g02080 Coffea canephora
CDE04G0766 Ceratophyllum demersum
CDE07G0703 Ceratophyllum demersum
Cfa007415 Carpinus fangiana
Ciclev10016934m.g Citrus clementina
CiPaw.03G039400 Carya illinoinensis
ClCG09G019030 Citrullus lanatus
COL.COLO4_28998 Corchorus olitorius
Cpa.g.sc3104.1 Carica papaya
CsaV3_5G027330 Cucumis sativus L.
CSS0037801 Camellia sinensis var. sinensis
DCAR_015051 Daucus carota
DCAR_021693 Daucus carota
Dinv33480 Davidia involucrata
Dinv35078 Davidia involucrata
Duzib147G0144 Durio zibethinus
ECA232G1653 Erigeron canadensis
EL10Ac1g00764 Beta vulgaris
FAN05G3636 Fragaria x ananassa
FAN05G4915 Fragaria x ananassa
FAN09G4345 Fragaria x ananassa
FAN14G0546 Fragaria x ananassa
FvH4_6g50860 Fragaria vesca
Glyma.05G006400 Glycine max
Glyma.19G006800 Glycine max
Gohir.A09G026900 Gossypium hirsutum
Gohir.A11G067000 Gossypium hirsutum
Gohir.D09G026600 Gossypium hirsutum
Gohir.D11G070900 Gossypium hirsutum
Gorai.006G030600 Gossypium raimondii
Gorai.007G076200 Gossypium raimondii
HanXRQChr07g0198841 Helianthus annuus
HanXRQChr09g0266101 Helianthus annuus
Haze_14687 Corylus avellana
Hma1.2p1_0858F.1_g229310 Hydrangea macrophylla
HPP92_008039 Vanilla planifolia
HPP92_024720 Vanilla planifolia
Lalb_Chr06g0175951 Lupinus albus
Lalb_Chr21g0319501 Lupinus albus
Lju41C36T6 Lonicera japonica
Lsat_1_v5_gn_2_91781 Lactuca sativa
Lsat_1_v5_gn_4_182740 Lactuca sativa
Manes.15G165700 Manihot esculenta
MBI16_g27097_MAGBIO Magnolia biondii
MD09G1031300 Malus domestica
MD17G1033200 Malus domestica
Medtr6g406210 Medicago truncatula
MELO3C021551.2 Cucumis melo
Migut.H00106 Erythranthe guttata
Migut.K01374 Erythranthe guttata
MSTRG.3296 Avicennia marina
Nitab4.5_0002306g0060 Nicotiana tabacum
Nitab4.5_0002416g0060 Nicotiana tabacum
Nitab4.5_0014517g0010 Nicotiana tabacum
Nn3g16854 Nelumbo nucifera
Oeu014861.1 Olea europaea
Oeu043043.1 Olea europaea
Oeu062928.1 Olea europaea
Os01g0638800 Oryza sativa ssp. japonica
Os01g0661650 Oryza sativa ssp. japonica
Peaxi162Scf00129g00124 Petunia axillaris
Peaxi162Scf00700g00522 Petunia axillaris
PGR142G3938 Punica granatum
PGSC0003DMG400000520 Solanum tuberosum
Phvul.004G012300 Phaseolus vulgaris
Potri.001G349700 Populus trichocarpa
Prupe.3G286300 Prunus persica
Psat1g056600 Pisum sativum
Psat1g056720 Pisum sativum
PSO017G2305 Papaver somniferum
PSO144G0121 Papaver somniferum
PSO170G4554 Papaver somniferum
PSO478G0492 Papaver somniferum
QL02p075994 Quercus lobata
RcHm_v2.0_Chr2g0172251 Rosa chinensis
Rhsim10G0020400 Rhododendron simsii
Sabra16G0229100 Salix brachista
SalBow7G2461 Salvia bowleyana
Sc16g0007930 Simmondsia chinensis
Sed0004184 Sechium edule
SEGI_19138 Sequoiadendron giganteum
SEGI_21704 Sequoiadendron giganteum
SEGI_22807 Sequoiadendron giganteum
SGA_v2.0_scaffold135G34886 Striga asiatica
SGA_v2.0_scaffold30G12455 Striga asiatica
SHI27192 Sapria himalayana
Solyc02g086760.1 Solanum lycopersicum
Solyc12g062840.1 Solanum lycopersicum
Sopen02g031520 Solanum pennellii
Sopen12g026520 Solanum pennellii
Sp3g00540 Schrenkiella parvula
Sp6g29350 Schrenkiella parvula
TAR622G1423 Trochodendron aralioides
TAR629G1679 Trochodendron aralioides
THA.LOC104821080 Tarenaya hassleriana
Thecc.04G011300 Theobroma cacao
Thhalv10014646m.g Eutrema salsugineum
Thhalv10021959m.g Eutrema salsugineum
TPR.G10806 Trifolium pratense
TPR.G35379 Trifolium pratense
TPR.G35382 Trifolium pratense
TWI56G0416 Tripterygium wilfordii
unitig_899.g15487 Utricularia gibba
vmacro05837 Vaccinium macrocarpon
VMungo0464G1178 Vigna mungo
Zm00001eb157680 Zea mays
Zm00001eb158870 Zea mays
Zm00001eb296260 Zea mays

User provided reference genes

Program Settings