Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p66890 Brassica napus
A07p01000 Brassica napus
Actinidia01647 Actinidia chinensis
Actinidia12290 Actinidia chinensis
Ah.02g128610 Amaranthus hybridus
Aqoxy4G01501 Aquilegia oxysepala
Aqoxy4G01544 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JG47X3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T4BBUF Arachis hypogaea
ATR0782G113 Amborella trichopoda
Atru.chr6.45 Acer truncatum
Atru.chr6.56 Acer truncatum
Atru.chr9.63 Acer truncatum
Atru.chr9.69 Acer truncatum
AUR62024866 Chenopodium quinoa
AUR62032503 Chenopodium quinoa
BcaB03g16877 Brassica carinata
BcaB04g17137 Brassica carinata
BcaC06g31946 Brassica carinata
BcaC06g31947 Brassica carinata
BcaC06g36613 Brassica carinata
BcaC08g44461 Brassica carinata
BolC6t37111H Brassica oleracea
BolC7t40625H Brassica oleracea
BraA01t02792Z Brassica rapa
C06p19120 Brassica napus
C07p02160 Brassica napus
CAN.G1379.23 Capsicum annuum
CAN.G989.3 Capsicum annuum
CANSAT01G2096 Cannabis sativa
CANSAT64G2797 Cannabis sativa
CARHR046110 Cardamine hirsuta
Carub.0003s3540 Capsella rubella
Cc00_g01280 Coffea canephora
Cc02_g36800 Coffea canephora
CDE02G1408 Ceratophyllum demersum
Ciclev10001110m.g Citrus clementina
Ciclev10030405m.g Citrus clementina
CiPaw.09G096800 Carya illinoinensis
CiPaw.15G107200 Carya illinoinensis
CiPaw.15G107300 Carya illinoinensis
ClCG04G000020 Citrullus lanatus
ClCG08G000010 Citrullus lanatus
COL.COLO4_11943 Corchorus olitorius
COL.COLO4_16251 Corchorus olitorius
Cpa.g.sc15.42 Carica papaya
DCAR_029460 Daucus carota
Dinv01746 Davidia involucrata
Dinv42629 Davidia involucrata
Duzib116G0260 Durio zibethinus
Duzib160G0520 Durio zibethinus
ECA234G3362 Erigeron canadensis
ECA248G1565 Erigeron canadensis
EL10Ac6g13938 Beta vulgaris
Eucgr.B01586 Eucalyptus grandis
Eucgr.B01611 Eucalyptus grandis
Eucgr.G00036 Eucalyptus grandis
FAN19G3173 Fragaria x ananassa
FAN26G1264 Fragaria x ananassa
FvH4_1g27954 Fragaria vesca
Glyma.09G018700 Glycine max
Glyma.13G026000 Glycine max
Gohir.A05G123200 Gossypium hirsutum
Gohir.A09G002900 Gossypium hirsutum
Gohir.A12G103850 Gossypium hirsutum
Gohir.D05G124100 Gossypium hirsutum
Gohir.D07G228750 Gossypium hirsutum
Gohir.D09G002700 Gossypium hirsutum
Gorai.001G263800 Gossypium raimondii
Gorai.006G003300 Gossypium raimondii
Gorai.009G128100 Gossypium raimondii
GSVIVG01029417001 Vitis vinifera
HanXRQChr05g0142711 Helianthus annuus
HanXRQChr12g0378911 Helianthus annuus
HanXRQChr12g0386151 Helianthus annuus
HanXRQChr15g0488451 Helianthus annuus
Haze_09951 Corylus avellana
Hma1.2p1_0052F.1_g030120 Hydrangea macrophylla
HPP92_025056 Vanilla planifolia
Hund15261 Selenicereus undatus
Lj6g0014124 Lotus japonicus
Lj9C241G5 Lonicera japonica
Lju225A7G63 Lonicera japonica
Lju225C0G3 Lonicera japonica
Lsat_1_v5_gn_8_167100 Lactuca sativa
Manes.06G015900 Manihot esculenta
Manes.18G143000 Manihot esculenta
Manes.18G143300 Manihot esculenta
MBI17_g35115_MAGBIO Magnolia biondii
MBI17_g35871_MAGBIO Magnolia biondii
MD00G1096100 Malus domestica
MELO3C034515.2 Cucumis melo
Migut.N00879 Erythranthe guttata
Nitab4.5_0001085g0040 Nicotiana tabacum
Nitab4.5_0001246g0010 Nicotiana tabacum
Nitab4.5_0004176g0010 Nicotiana tabacum
Nitab4.5_0005690g0020 Nicotiana tabacum
Nitab4.5_0007926g0020 Nicotiana tabacum
Nn3g20631 Nelumbo nucifera
Nn5g27095 Nelumbo nucifera
Oeu000168.1 Olea europaea
Oeu000169.3 Olea europaea
Os07g0657600 Oryza sativa ssp. japonica
Peaxi162Scf00194g00934 Petunia axillaris
PGR042G3689 Punica granatum
PGSC0003DMG400014526 Solanum tuberosum
PGSC0003DMG400018222 Solanum tuberosum
PGSC0003DMG400040448 Solanum tuberosum
Phvul.006G133500 Phaseolus vulgaris
Phvul.L001673 Phaseolus vulgaris
Potri.003G046300 Populus trichocarpa
Prupe.4G287800 Prunus persica
PSO170G3824 Papaver somniferum
QL01p052835 Quercus lobata
QL01p053234 Quercus lobata
QL02p104239 Quercus lobata
QL07p001518 Quercus lobata
QL93p0255_0001 Quercus lobata
QL93p1868_0059 Quercus lobata
QL93p1868_0064 Quercus lobata
RcHm_v2.0_Chr3g0496761 Rosa chinensis
Rhsim05G0120900 Rhododendron simsii
Sabra03G0019800 Salix brachista
SalBow3G4053 Salvia bowleyana
Sc07g0003350 Simmondsia chinensis
Sc07g0003360 Simmondsia chinensis
Sed0010261 Sechium edule
SGA_v2.0_scaffold150G36624 Striga asiatica
SGA_v2.0_scaffold401G50971 Striga asiatica
Solyc01g102670.3 Solanum lycopersicum
Sopen01g045080 Solanum pennellii
Sopen02g001190 Solanum pennellii
Sopen03g023610 Solanum pennellii
SpUn0005_0090 Schrenkiella parvula
SpUn0422_0010 Schrenkiella parvula
TAR629G0123 Trochodendron aralioides
THA.LOC104809040 Tarenaya hassleriana
Thecc.06G025200 Theobroma cacao
Thecc.07G187300 Theobroma cacao
Thhalv10028036m.g Eutrema salsugineum
Thhalv10028065m.g Eutrema salsugineum
TWI15G0790 Tripterygium wilfordii
TWI23G0323 Tripterygium wilfordii
TWI31G1352 Tripterygium wilfordii
vmacro19812 Vaccinium macrocarpon
VMungo0540G0564 Vigna mungo

User provided reference genes

Program Settings