Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p13150 Brassica napus
Aa31LG6G3830 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1637__1638 Anthoceros agrestis
Actinidia05522 Actinidia chinensis
Ah.09g235020 Amaranthus hybridus
AL7G32100 Arabidopsis lyrata
AL7G32110 Arabidopsis lyrata
Aqoxy1G03259 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FU33AK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K6JFDD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QZ1TNI Arachis hypogaea
AT4G21820 Arabidopsis thaliana
ATR0752G007 Amborella trichopoda
ATR0752G018 Amborella trichopoda
Atru.chr10.2199 Acer truncatum
AUR62012682 Chenopodium quinoa
AUR62021974 Chenopodium quinoa
BcaC09g51197 Brassica carinata
BcaNung02250 Brassica carinata
BolC1t01538H Brassica oleracea
BraA01t01259Z Brassica rapa
C01p15840 Brassica napus
CAN.G569.18 Capsicum annuum
CANSAT56G1527 Cannabis sativa
CARHR228530 Cardamine hirsuta
Carub.0007s1958 Capsella rubella
Ca_21091_v3 Cicer arietinum L.
Ca_30199_v3 Cicer arietinum L.
Cc09_g01850 Coffea canephora
CDE05G2160 Ceratophyllum demersum
Cfa000241 Carpinus fangiana
Cfa022813 Carpinus fangiana
Ciclev10014034m.g Citrus clementina
CiPaw.02G155600 Carya illinoinensis
CiPaw.09G089900 Carya illinoinensis
CiPaw.09G090000 Carya illinoinensis
ClCG03G004830 Citrullus lanatus
COL.COLO4_31753 Corchorus olitorius
Cpa.g.sc198.36 Carica papaya
Cpa.g.sc198.37 Carica papaya
Cre06.g281200 Chlamydomonas reinhardtii
CsaV3_1G010870 Cucumis sativus L.
CSS0001066 Camellia sinensis var. sinensis
CSS0012929 Camellia sinensis var. sinensis
CSS0017164 Camellia sinensis var. sinensis
CSS0020297 Camellia sinensis var. sinensis
CSS0021361 Camellia sinensis var. sinensis
DCAR_004209 Daucus carota
Dinv13878 Davidia involucrata
Duzib235G1549 Durio zibethinus
ECA236G1313 Erigeron canadensis
EL10Ac8g20027 Beta vulgaris
Eucgr.D01308 Eucalyptus grandis
FAN21G2432 Fragaria x ananassa
FAN21G3214 Fragaria x ananassa
FAN21G4061 Fragaria x ananassa
FAN25G1001 Fragaria x ananassa
FAN25G2437 Fragaria x ananassa
FvH4_3g02340 Fragaria vesca
Glyma.07G259400 Glycine max
Glyma.17G014900 Glycine max
Gohir.A06G147800 Gossypium hirsutum
Gohir.A10G013700 Gossypium hirsutum
Gohir.D06G153700 Gossypium hirsutum
Gohir.D10G013600 Gossypium hirsutum
Gorai.010G179700 Gossypium raimondii
Gorai.011G015400 Gossypium raimondii
GSVIVG01002377001 Vitis vinifera
GSVIVG01002955001 Vitis vinifera
GSVIVG01004517001 Vitis vinifera
HanXRQChr05g0129591 Helianthus annuus
HanXRQChr07g0198521 Helianthus annuus
Haze_06780 Corylus avellana
HPP92_012318 Vanilla planifolia
HPP92_012319 Vanilla planifolia
HPP92_012397 Vanilla planifolia
Hund23483 Selenicereus undatus
Lalb_Chr01g0014921 Lupinus albus
Lj2C270G14 Lonicera japonica
Lj4g0017916 Lotus japonicus
Lsat_1_v5_gn_7_17620 Lactuca sativa
Lsat_1_v5_gn_7_17640 Lactuca sativa
Manes.17G037700 Manihot esculenta
Mapoly0043s0047 Marchantia polymorpha
MBI02_g22104_MAGBIO Magnolia biondii
MCO03G113 Micromonas commoda
MD10G1319200 Malus domestica
MD10G1319300 Malus domestica
Medtr4g131940 Medicago truncatula
MELO3C002466.2 Cucumis melo
Migut.M01303 Erythranthe guttata
MSTRG.15978 Avicennia marina
MSTRG.15979 Avicennia marina
Nitab4.5_0003254g0110 Nicotiana tabacum
Nitab4.5_0007482g0050 Nicotiana tabacum
Nn1g03565 Nelumbo nucifera
Oeu063907.1 Olea europaea
Os07g0517400 Oryza sativa ssp. japonica
Peaxi162Scf00262g00611 Petunia axillaris
PGR004G2872 Punica granatum
PGSC0003DMG400016486 Solanum tuberosum
Phvul.003G077600 Phaseolus vulgaris
Potri.004G017500 Populus trichocarpa
Pp3c24_1350 Physcomitrium patens
PRCOL_00000773 Prasinoderma coloniale
Prupe.4G023200 Prunus persica
Psat4g007280 Pisum sativum
PSO541G6479 Papaver somniferum
PSO675G7058 Papaver somniferum
QL05p073557 Quercus lobata
QL05p073800 Quercus lobata
RcHm_v2.0_Chr5g0003561 Rosa chinensis
RcHm_v2.0_Chr5g0054711 Rosa chinensis
RcHm_v2.0_Chr6g0271351 Rosa chinensis
Rhsim13G0155600 Rhododendron simsii
Sabra04G0009600 Salix brachista
Sc17g0007260 Simmondsia chinensis
Sed0027912 Sechium edule
SEGI_17063 Sequoiadendron giganteum
SEGI_19133 Sequoiadendron giganteum
SEGI_21682 Sequoiadendron giganteum
SEGI_29404 Sequoiadendron giganteum
SEGI_30095 Sequoiadendron giganteum
SEGI_37992 Sequoiadendron giganteum
SGA_v2.0_scaffold186G40236 Striga asiatica
SGA_v2.0_scaffold4G01924 Striga asiatica
SHI14112 Sapria himalayana
SHI23549 Sapria himalayana
SHI34979 Sapria himalayana
SMO200G0122 Selaginella moellendorffii
Solyc02g080390.2 Solanum lycopersicum
Solyc02g080400.3 Solanum lycopersicum
Sopen02g025090 Solanum pennellii
Sp7g19990 Schrenkiella parvula
TAR627G0931 Trochodendron aralioides
THA.LOC104813036 Tarenaya hassleriana
Thecc.06G218200 Theobroma cacao
Thhalv10024235m.g Eutrema salsugineum
TPR.G37081 Trifolium pratense
TWI63G0677 Tripterygium wilfordii
unitig_748.g7100 Utricularia gibba
vmacro03694 Vaccinium macrocarpon
VMungo0331G0651 Vigna mungo
VMungo1215G1456 Vigna mungo
VMungo1383G0466 Vigna mungo
Zm00001eb322760 Zea mays

User provided reference genes

Program Settings