Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p20180 Brassica napus
Aa31LG3G14040 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1617 Anthoceros agrestis
Actinidia39017 Actinidia chinensis
Ah.03g137150 Amaranthus hybridus
AL6G41220 Arabidopsis lyrata
Aqoxy6G00135 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3Y07W7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R3RHS8 Arachis hypogaea
AT4G06599 Arabidopsis thaliana
ATR1134G078 Amborella trichopoda
Atru.chr6.699 Acer truncatum
AUR62041110 Chenopodium quinoa
BcaB01g02499 Brassica carinata
BcaB05g22040 Brassica carinata
BcaB07g32185 Brassica carinata
BcaC09g50447 Brassica carinata
BcaNung00113 Brassica carinata
BcaNung03473 Brassica carinata
BcaNung03475 Brassica carinata
BolC1t02482H Brassica oleracea
BraA01t01942Z Brassica rapa
BraA03t14123Z Brassica rapa
C01p25320 Brassica napus
C07p48650 Brassica napus
CAN.G798.38 Capsicum annuum
CANSAT54G0278 Cannabis sativa
CARHR287310 Cardamine hirsuta
Carub.0006s2628 Capsella rubella
Ca_17836_v3 Cicer arietinum L.
CBR_g37945 Chara braunii
Cc02_g22900 Coffea canephora
CDE08G1137 Ceratophyllum demersum
CDE08G1585 Ceratophyllum demersum
Cfa005485 Carpinus fangiana
Cfa012958 Carpinus fangiana
Ciclev10001794m.g Citrus clementina
CiPaw.05G051000 Carya illinoinensis
ClCG11G013410 Citrullus lanatus
COL.COLO4_11752 Corchorus olitorius
Cpa.g.sc38.29 Carica papaya
Cre04.g228900 Chlamydomonas reinhardtii
CsaV3_5G029930 Cucumis sativus L.
CsaV3_5G029940 Cucumis sativus L.
CSS0000837 Camellia sinensis var. sinensis
CSS0029208 Camellia sinensis var. sinensis
DCAR_006685 Daucus carota
Dinv01848 Davidia involucrata
Duzib132G0282 Durio zibethinus
ECA234G0102 Erigeron canadensis
EL10Ac6g13975 Beta vulgaris
EL10Ac9g22557 Beta vulgaris
EL10As26g24245 Beta vulgaris
Eucgr.G00398 Eucalyptus grandis
FAN04G0484 Fragaria x ananassa
FAN06G2257 Fragaria x ananassa
FAN06G4878 Fragaria x ananassa
FAN08G0254 Fragaria x ananassa
FAN09G4282 Fragaria x ananassa
FAN13G0306 Fragaria x ananassa
FAN14G4428 Fragaria x ananassa
FAN18G1533 Fragaria x ananassa
FvH4_1g28920 Fragaria vesca
FvH4_5g28710 Fragaria vesca
FvH4_6g22010 Fragaria vesca
FvH4_7g16160 Fragaria vesca
FvH4_7g16790 Fragaria vesca
Glyma.05G168000 Glycine max
Glyma.08G126400 Glycine max
Gohir.A03G192500 Gossypium hirsutum
Gohir.D02G213500 Gossypium hirsutum
Gorai.005G241400 Gossypium raimondii
GSVIVG01023290001 Vitis vinifera
HanXRQChr10g0294681 Helianthus annuus
HanXRQChr10g0294691 Helianthus annuus
Haze_01819 Corylus avellana
Haze_26359 Corylus avellana
Hma1.2p1_1108F.1_g257830 Hydrangea macrophylla
HPP92_001076 Vanilla planifolia
Lalb_Chr07g0185841 Lupinus albus
Lj4g0017883 Lotus japonicus
Lj5C260G15 Lonicera japonica
LjContig00141g0011565 Lotus japonicus
Lsat_1_v5_gn_1_60640 Lactuca sativa
Lsat_1_v5_gn_1_60800 Lactuca sativa
Lsat_1_v5_gn_1_60880 Lactuca sativa
Lsat_1_v5_gn_5_105901 Lactuca sativa
Manes.07G021300 Manihot esculenta
Mapoly0019s0035 Marchantia polymorpha
MBI09_g07124_MAGBIO Magnolia biondii
MCO16G506 Micromonas commoda
MD08G1239400 Malus domestica
MD08G1239500 Malus domestica
MD15G1431000 Malus domestica
Medtr8g088640 Medicago truncatula
MELO3C011838.2 Cucumis melo
Migut.B00805 Erythranthe guttata
MSTRG.16505 Avicennia marina
Nitab4.5_0000948g0210 Nicotiana tabacum
Nitab4.5_0002698g0020 Nicotiana tabacum
Nn5g27579 Nelumbo nucifera
Oeu032113.1 Olea europaea
Oeu049835.1 Olea europaea
Os01g0875400 Oryza sativa ssp. japonica
Peaxi162Scf00011g00742 Petunia axillaris
PGR042G0281 Punica granatum
PGSC0003DMG400024901 Solanum tuberosum
Phvul.002G248400 Phaseolus vulgaris
Potri.003G011300 Populus trichocarpa
Potri.004G219300 Populus trichocarpa
Pp3c1_27970 Physcomitrium patens
PRCOL_00002191 Prasinoderma coloniale
PRCOL_00006478 Prasinoderma coloniale
Prupe.1G576000 Prunus persica
Psat7g063440 Pisum sativum
PSO170G6393 Papaver somniferum
QL02p099940 Quercus lobata
RcHm_v2.0_Chr7g0220871 Rosa chinensis
Rhsim11G0126200 Rhododendron simsii
Sabra01G0166400 Salix brachista
Sabra03G0006800 Salix brachista
Sabra03G0007100 Salix brachista
Sabra03G0007400 Salix brachista
SalBow8G3448 Salvia bowleyana
Sc07g0004980 Simmondsia chinensis
Sed0011379 Sechium edule
SEGI_09590 Sequoiadendron giganteum
SGA_v2.0_scaffold338G49226 Striga asiatica
SMO115G0039 Selaginella moellendorffii
SMO358G0515 Selaginella moellendorffii
Solyc01g058590.1 Solanum lycopersicum
Solyc01g103850.4 Solanum lycopersicum
Sopen01g024260 Solanum pennellii
Sopen01g046230 Solanum pennellii
Sp7g16990 Schrenkiella parvula
TAR376G0995 Trochodendron aralioides
THA.LOC104803191 Tarenaya hassleriana
Thecc.02G090800 Theobroma cacao
Thhalv10025663m.g Eutrema salsugineum
TPR.G6800 Trifolium pratense
TWI59G0454 Tripterygium wilfordii
unitig_749.g14130 Utricularia gibba
vmacro01733 Vaccinium macrocarpon
VMungo0251G3523 Vigna mungo
Zm00001eb146120 Zea mays
Zm00001eb366430 Zea mays

User provided reference genes

Program Settings