Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p24110 Brassica napus
Aa31LG6G16530 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1211 Anthoceros agrestis
Actinidia00615 Actinidia chinensis
Actinidia20505 Actinidia chinensis
Ah.01g022840 Amaranthus hybridus
AL7G10530 Arabidopsis lyrata
AL7G44960 Arabidopsis lyrata
Aqoxy5G01804 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IE9R9X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JXV2U6 Arachis hypogaea
AT4G38640 Arabidopsis thaliana
ATR0579G151 Amborella trichopoda
Atru.chr5.3293 Acer truncatum
AUR62010059 Chenopodium quinoa
AUR62013051 Chenopodium quinoa
BcaB03g12216 Brassica carinata
BcaC01g00246 Brassica carinata
BolC3t19975H Brassica oleracea
BraA08t34366Z Brassica rapa
C03p77200 Brassica napus
CAN.G588.54 Capsicum annuum
CANSAT54G2532 Cannabis sativa
CARHR294360 Cardamine hirsuta
Carub.0007s0051 Capsella rubella
Ca_19053_v3 Cicer arietinum L.
CBR_g32587 Chara braunii
Cc02_g16320 Coffea canephora
CDE02G2386 Ceratophyllum demersum
CDE02G2974 Ceratophyllum demersum
CDE04G1166 Ceratophyllum demersum
CDE04G1868 Ceratophyllum demersum
Cfa005223 Carpinus fangiana
Ciclev10028126m.g Citrus clementina
CiPaw.05G080400 Carya illinoinensis
CiPaw.06G123200 Carya illinoinensis
ClCG02G011810 Citrullus lanatus
COL.COLO4_17310 Corchorus olitorius
Cpa.g.sc37.160 Carica papaya
Cpa.g.sc37.161 Carica papaya
Cre06.g278550 Chlamydomonas reinhardtii
Cre09.g390467 Chlamydomonas reinhardtii
Cre14.g617800 Chlamydomonas reinhardtii
CsaV3_2G015970 Cucumis sativus L.
CSS0048155 Camellia sinensis var. sinensis
DCAR_003159 Daucus carota
Dinv41951 Davidia involucrata
Duzib052G1050 Durio zibethinus
Duzib132G0556 Durio zibethinus
ECA246G0167 Erigeron canadensis
EL10Ac9g21400 Beta vulgaris
Eucgr.I01400 Eucalyptus grandis
FAN15G3563 Fragaria x ananassa
FAN20G0465 Fragaria x ananassa
FAN24G2272 Fragaria x ananassa
FAN27G2227 Fragaria x ananassa
FvH4_2g01450 Fragaria vesca
Glyma.08G315000 Glycine max
Glyma.11G106500 Glycine max
Glyma.12G031600 Glycine max
Gohir.A01G166700 Gossypium hirsutum
Gohir.D01G157700 Gossypium hirsutum
Gorai.002G195800 Gossypium raimondii
GSVIVG01024045001 Vitis vinifera
HanXRQChr14g0436981 Helianthus annuus
HanXRQChr17g0543921 Helianthus annuus
Haze_02160 Corylus avellana
Hma1.2p1_0163F.1_g072320 Hydrangea macrophylla
HPP92_025488 Vanilla planifolia
Hund06424 Selenicereus undatus
Lalb_Chr01g0001781 Lupinus albus
Lalb_Chr01g0001791 Lupinus albus
Lalb_Chr03g0025091 Lupinus albus
Lj3g0012456 Lotus japonicus
Lj5A181T55 Lonicera japonica
Lj9A392T36 Lonicera japonica
Lj9A392T37 Lonicera japonica
Lsat_1_v5_gn_3_46280 Lactuca sativa
Manes.04G073300 Manihot esculenta
Manes.05G150701 Manihot esculenta
Manes.07G080900 Manihot esculenta
Manes.11G095300 Manihot esculenta
Mapoly0029s0105 Marchantia polymorpha
MBI09_g14140_MAGBIO Magnolia biondii
MCO01G409 Micromonas commoda
MCO08G169 Micromonas commoda
MD05G1119500 Malus domestica
MD08G1139200 Malus domestica
MD10G1123200 Malus domestica
Medtr4g073620 Medicago truncatula
MELO3C020808.2 Cucumis melo
Migut.B00095 Erythranthe guttata
Migut.B00916 Erythranthe guttata
Migut.N03290 Erythranthe guttata
MSTRG.16896 Avicennia marina
Nitab4.5_0001891g0030 Nicotiana tabacum
Nitab4.5_0005837g0020 Nicotiana tabacum
Nn5g30735 Nelumbo nucifera
Oeu006646.1 Olea europaea
Oeu014453.1 Olea europaea
Peaxi162Scf00362g00839 Petunia axillaris
PGSC0003DMG402006199 Solanum tuberosum
Phvul.011G034500 Phaseolus vulgaris
Potri.004G173600 Populus trichocarpa
Potri.009G132900 Populus trichocarpa
Pp3c15_6240 Physcomitrium patens
Pp3c24_1990 Physcomitrium patens
PRCOL_00003313 Prasinoderma coloniale
Prupe.8G163700 Prunus persica
Psat7g175760 Pisum sativum
PSO170G2472 Papaver somniferum
PSO700G0063 Papaver somniferum
QL11p049938 Quercus lobata
RcHm_v2.0_Chr6g0244091 Rosa chinensis
RcHm_v2.0_Chr7g0187121 Rosa chinensis
Rhsim11G0191300 Rhododendron simsii
Sabra04G0115600 Salix brachista
Sabra09G0103200 Salix brachista
SalBow1G7891 Salvia bowleyana
Sc08g0003030 Simmondsia chinensis
Sed0006607 Sechium edule
SEGI_02117 Sequoiadendron giganteum
SEGI_18476 Sequoiadendron giganteum
SGA_v2.0_scaffold300G47755 Striga asiatica
SGA_v2.0_scaffold32G13272 Striga asiatica
SGA_v2.0_scaffold38G14986 Striga asiatica
SGA_v2.0_scaffold58G20392 Striga asiatica
SGA_v2.0_scaffold5G02731 Striga asiatica
SMO012G0038 Selaginella moellendorffii
Solyc01g111370.3 Solanum lycopersicum
Sopen01g053440 Solanum pennellii
Sp7g37140 Schrenkiella parvula
TAR381G1224 Trochodendron aralioides
THA.LOC104804092 Tarenaya hassleriana
THA.LOC104824770 Tarenaya hassleriana
Thecc.02G062500 Theobroma cacao
Thecc.02G062800 Theobroma cacao
Thhalv10024826m.g Eutrema salsugineum
TPR.G39261 Trifolium pratense
TPR.G40783 Trifolium pratense
TWI31G1222 Tripterygium wilfordii
TWI75G0220 Tripterygium wilfordii
unitig_0.g42 Utricularia gibba
vmacro02269 Vaccinium macrocarpon
VMungo1080G0079 Vigna mungo
VMungo1127G1693 Vigna mungo

User provided reference genes

Program Settings