Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p30930 Brassica napus
A06p39310 Brassica napus
A09p04360 Brassica napus
Aa31LG4G7530 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis
Actinidia20603 Actinidia chinensis
Actinidia20617 Actinidia chinensis
Actinidia24711 Actinidia chinensis
Ah.08g210400 Amaranthus hybridus
Ah.08g219720 Amaranthus hybridus
AL8G20970 Arabidopsis lyrata
Aqoxy3G04181 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea
AT5G48240 Arabidopsis thaliana
ATR0225G032 Amborella trichopoda
Atru.chr6.3431 Acer truncatum
AUR62008242 Chenopodium quinoa
AUR62030994 Chenopodium quinoa
BcaB04g19566 Brassica carinata
BcaC04g23785 Brassica carinata
BcaC06g30816 Brassica carinata
BcaC07g37807 Brassica carinata
BolC7t44418H Brassica oleracea
BolC8t48196H Brassica oleracea
BolC9t53395H Brassica oleracea
BraA06t26845Z Brassica rapa
BraA09t36073Z Brassica rapa
C07p38970 Brassica napus
C09p04670 Brassica napus
CAN.G1447.4 Capsicum annuum
CAN.G715.5 Capsicum annuum
CANSAT64G2107 Cannabis sativa
CARHR218550 Cardamine hirsuta
CARHR286520 Cardamine hirsuta
Carub.0008s0781 Capsella rubella
Ca_02017_v3 Cicer arietinum L.
CBR_g23113 Chara braunii
Cc00_g14350 Coffea canephora
Cc00_g18660 Coffea canephora
Cc00_g29960 Coffea canephora
Cc02_g33980 Coffea canephora
Cc07_g20180 Coffea canephora
Cc07_g20190 Coffea canephora
CDE09G0959 Ceratophyllum demersum
CDE11G1110 Ceratophyllum demersum
Cfa014201 Carpinus fangiana
Ciclev10015959m.g Citrus clementina
CiPaw.03G283900 Carya illinoinensis
CiPaw.04G197900 Carya illinoinensis
ClCG02G003040 Citrullus lanatus
COL.COLO4_19654 Corchorus olitorius
Cpa.g.sc136.55 Carica papaya
Cre02.g095850 Chlamydomonas reinhardtii
CsaV3_7G002370 Cucumis sativus L.
CSS0023894 Camellia sinensis var. sinensis
CSS0035525 Camellia sinensis var. sinensis
DCAR_021083 Daucus carota
Dinv05324 Davidia involucrata
Dinv21322 Davidia involucrata
Duzib138G0133 Durio zibethinus
Duzib211G0098 Durio zibethinus
ECA248G0062 Erigeron canadensis
EL10Ac5g10791 Beta vulgaris
Eucgr.K01388 Eucalyptus grandis
FAN02G4414 Fragaria x ananassa
FAN05G3842 Fragaria x ananassa
FAN09G4460 Fragaria x ananassa
FAN14G3535 Fragaria x ananassa
FvH4_6g40390 Fragaria vesca
Glyma.03G238300 Glycine max
Glyma.19G235800 Glycine max
Gohir.A07G163100 Gossypium hirsutum
Gohir.A11G147700 Gossypium hirsutum
Gohir.D07G170200 Gossypium hirsutum
Gohir.D11G154600 Gossypium hirsutum
Gorai.001G190100 Gossypium raimondii
Gorai.007G164700 Gossypium raimondii
GSVIVG01030126001 Vitis vinifera
HanXRQChr01g0006811 Helianthus annuus
Haze_12586 Corylus avellana
Haze_24928 Corylus avellana
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla
Hma1.2p1_1388F.1_g279940 Hydrangea macrophylla
HPP92_009941 Vanilla planifolia
Lalb_Chr21g0315451 Lupinus albus
Lj1A800T38 Lonicera japonica
Lj1A800T39 Lonicera japonica
Lj4g0024217 Lotus japonicus
Lsat_1_v5_gn_0_13881 Lactuca sativa
Manes.13G059900 Manihot esculenta
Mapoly0148s0006 Marchantia polymorpha
MBI04_g26115_MAGBIO Magnolia biondii
MD09G1131700 Malus domestica
MD17G1119200 Malus domestica
MD17G1119400 Malus domestica
MELO3C024180.2 Cucumis melo
Migut.M00065 Erythranthe guttata
MSTRG.6620 Avicennia marina
Nitab4.5_0003086g0050 Nicotiana tabacum
Nitab4.5_0004941g0060 Nicotiana tabacum
Nn1g02049 Nelumbo nucifera
Nn1g02050 Nelumbo nucifera
Nn3g19477 Nelumbo nucifera
Oeu022053.1 Olea europaea
Os11g0266000 Oryza sativa ssp. japonica
Peaxi162Scf00359g00214 Petunia axillaris
PGR044G0745 Punica granatum
PGSC0003DMG400004112 Solanum tuberosum
Phvul.006G092400 Phaseolus vulgaris
Potri.014G170500 Populus trichocarpa
Pp3c22_320 Physcomitrium patens
Pp3c22_322 Physcomitrium patens
PRCOL_00000835 Prasinoderma coloniale
Prupe.3G194600 Prunus persica
Psat5g216800 Pisum sativum
Psat7g043480 Pisum sativum
PSO210G0096 Papaver somniferum
PSO782G0752 Papaver somniferum
PSO782G4695 Papaver somniferum
PSO782G5585 Papaver somniferum
QL01p014609 Quercus lobata
QL03p064628 Quercus lobata
QL03p064635 Quercus lobata
QL04p067008 Quercus lobata
RcHm_v2.0_Chr2g0155591 Rosa chinensis
Rhsim04G0007200 Rhododendron simsii
SalBow7G0407 Salvia bowleyana
Sc20g0004590 Simmondsia chinensis
Sed0007088 Sechium edule
SEGI_31719 Sequoiadendron giganteum
SGA_v2.0_scaffold181G39700 Striga asiatica
Solyc05g005730.4 Solanum lycopersicum
Sopen05g001730 Solanum pennellii
Sp2g18610 Schrenkiella parvula
TAR629G2368 Trochodendron aralioides
THA.LOC104802634 Tarenaya hassleriana
THA.LOC104819027 Tarenaya hassleriana
Thecc.01G199500 Theobroma cacao
Thhalv10004636m.g Eutrema salsugineum
TPR.G35685 Trifolium pratense
TPR.G3861 Trifolium pratense
TWI75G0909 Tripterygium wilfordii
unitig_749.g13565 Utricularia gibba
VMungo0540G1824 Vigna mungo
Zm00001eb298370 Zea mays

User provided reference genes

Program Settings