Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p43800 Brassica napus
A06p32100 Brassica napus
Aa31LG1G16710 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1569 Anthoceros agrestis
Actinidia20002 Actinidia chinensis
Actinidia28244 Actinidia chinensis
Actinidia28853 Actinidia chinensis
Actinidia30832 Actinidia chinensis
AL8G42810 Arabidopsis lyrata
Aqoxy6G00745 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0B7H6P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LGH16T Arachis hypogaea
AT5G65250 Arabidopsis thaliana
ATR1133G017 Amborella trichopoda
Atru.chr3.1372 Acer truncatum
AUR62001985 Chenopodium quinoa
AUR62003820 Chenopodium quinoa
BcaB07g34227 Brassica carinata
BcaC01g02761 Brassica carinata
BcaNung07054 Brassica carinata
BolC2t12462H Brassica oleracea
BraA02t09304Z Brassica rapa
BraA06t26139Z Brassica rapa
C02p63960 Brassica napus
C03p60830 Brassica napus
CAN.G905.36 Capsicum annuum
CARHR279200 Cardamine hirsuta
Carub.0008s2612 Capsella rubella
Ca_16517_v3 Cicer arietinum L.
Ca_17754_v3 Cicer arietinum L.
Cc07_g14830 Coffea canephora
CDE03G0147 Ceratophyllum demersum
CDE05G0874 Ceratophyllum demersum
CDE05G3641 Ceratophyllum demersum
Cfa002623 Carpinus fangiana
Ciclev10026087m.g Citrus clementina
CiPaw.02G062100 Carya illinoinensis
CiPaw.03G144000 Carya illinoinensis
CiPaw.04G102700 Carya illinoinensis
CiPaw.11G071200 Carya illinoinensis
ClCG01G018660 Citrullus lanatus
ClCG07G017400 Citrullus lanatus
COL.COLO4_27276 Corchorus olitorius
Cpa.g.sc55.88 Carica papaya
CsaV3_4G004630 Cucumis sativus L.
CsaV3_6G045320 Cucumis sativus L.
CsaV3_UNG129000 Cucumis sativus L.
CsaV3_UNG223540 Cucumis sativus L.
CSS0008069 Camellia sinensis var. sinensis
DCAR_014210 Daucus carota
Dinv13215 Davidia involucrata
Duzib147G1408 Durio zibethinus
Duzib187G0267 Durio zibethinus
ECA238G2162 Erigeron canadensis
EL10Ac6g15137 Beta vulgaris
Eucgr.I00513 Eucalyptus grandis
FAN19G2087 Fragaria x ananassa
FAN23G2516 Fragaria x ananassa
FAN28G0994 Fragaria x ananassa
FvH4_1g20490 Fragaria vesca
Glyma.05G176600 Glycine max
Glyma.08G134000 Glycine max
Gohir.A02G128100 Gossypium hirsutum
Gohir.D03G039500 Gossypium hirsutum
Gorai.003G040700 Gossypium raimondii
GSVIVG01006633001 Vitis vinifera
HanXRQChr14g0445521 Helianthus annuus
Haze_24872 Corylus avellana
Haze_24881 Corylus avellana
Hma1.2p1_0019F.1_g013610 Hydrangea macrophylla
HPP92_016780 Vanilla planifolia
Hund13599 Selenicereus undatus
Lalb_Chr07g0185271 Lupinus albus
Lj2C542T5 Lonicera japonica
Lj2C542T6 Lonicera japonica
Lj4A897G79 Lonicera japonica
Lj4g0010322 Lotus japonicus
Lsat_1_v5_gn_2_66460 Lactuca sativa
Manes.12G131800 Manihot esculenta
Mapoly0112s0020 Marchantia polymorpha
MBI02_g02178_MAGBIO Magnolia biondii
MBI02_g27971_MAGBIO Magnolia biondii
MBI02_g48054_MAGBIO Magnolia biondii
MD00G1037300 Malus domestica
MD01G1033600 Malus domestica
Medtr3g086990 Medicago truncatula
Medtr8g089995 Medicago truncatula
MELO3C007745.2 Cucumis melo
MELO3C017601.2 Cucumis melo
Migut.H02344 Erythranthe guttata
Migut.L00147 Erythranthe guttata
MSTRG.2575 Avicennia marina
MSTRG.3768 Avicennia marina
Nitab4.5_0000743g0090 Nicotiana tabacum
Nitab4.5_0004570g0010 Nicotiana tabacum
Nn1g06223 Nelumbo nucifera
Nn5g28615 Nelumbo nucifera
Oeu001799.2 Olea europaea
Oeu032406.1 Olea europaea
Os08g0484800 Oryza sativa ssp. japonica
Peaxi162Scf00381g00914 Petunia axillaris
PGR004G1180 Punica granatum
PGR102G1872 Punica granatum
PGSC0003DMG400016159 Solanum tuberosum
Phvul.002G257700 Phaseolus vulgaris
Potri.005G073500 Populus trichocarpa
Potri.007G095600 Populus trichocarpa
Pp3c10_24690 Physcomitrium patens
Prupe.6G191100 Prunus persica
Psat5g090640 Pisum sativum
Psat7g056800 Pisum sativum
PSO210G3532 Papaver somniferum
PSO447G0271 Papaver somniferum
QL06p048470 Quercus lobata
RcHm_v2.0_Chr2g0112751 Rosa chinensis
Rhsim08G0012700 Rhododendron simsii
Sabra05G0060000 Salix brachista
Sabra07G0078700 Salix brachista
SalBow3G3886 Salvia bowleyana
SalBow3G4482 Salvia bowleyana
SalBow5G0552 Salvia bowleyana
SalBow7G1065 Salvia bowleyana
Sc03g0000070 Simmondsia chinensis
Sed0002157 Sechium edule
Sed0021389 Sechium edule
Sed0027637 Sechium edule
SEGI_40329 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31501 Striga asiatica
SGA_v2.0_scaffold335G49113 Striga asiatica
SMO171G0129 Selaginella moellendorffii
Solyc11g009070.2 Solanum lycopersicum
Sopen11g004840 Solanum pennellii
Sp2g28350 Schrenkiella parvula
TAR362G0353 Trochodendron aralioides
TAR633G1456 Trochodendron aralioides
THA.LOC104798878 Tarenaya hassleriana
THA.LOC104807680 Tarenaya hassleriana
Thecc.01G097800 Theobroma cacao
Thhalv10004756m.g Eutrema salsugineum
TPR.G6195 Trifolium pratense
TWI53G2081 Tripterygium wilfordii
TWI77G0548 Tripterygium wilfordii
unitig_748.g8652 Utricularia gibba
unitig_899.g14551 Utricularia gibba
vmacro18586 Vaccinium macrocarpon
VMungo0251G0355 Vigna mungo

User provided reference genes

Program Settings