Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p39210 Brassica napus
A03p05460 Brassica napus
Aa31LG3G15010 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1465 Anthoceros agrestis
Actinidia24470 Actinidia chinensis
Ah.06g194700 Amaranthus hybridus
AL6G23010 Arabidopsis lyrata
Aqoxy1G00386 Aquilegia oxysepala
Aqoxy4G01955 Aquilegia oxysepala
Aqoxy7G02965 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3CD1QA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NHHR58 Arachis hypogaea
AT5G12220 Arabidopsis thaliana
ATR1096G100 Amborella trichopoda
Atru.chr10.529 Acer truncatum
Atru.chr11.1397 Acer truncatum
Atru.chr11.1398 Acer truncatum
Atru.chr11.1399 Acer truncatum
Atru.chr11.1591 Acer truncatum
AUR62000209 Chenopodium quinoa
AUR62006555 Chenopodium quinoa
BcaB01g05418 Brassica carinata
BolC3t13143H Brassica oleracea
BraA03t09884Z Brassica rapa
C03p06370 Brassica napus
CAN.G1514.1 Capsicum annuum
CAN.G280.28 Capsicum annuum
CAN.G437.19 Capsicum annuum
CANSAT11G0534 Cannabis sativa
CARHR200900 Cardamine hirsuta
Carub.0006s1072 Capsella rubella
Ca_06203_v3 Cicer arietinum L.
Ca_06206_v3 Cicer arietinum L.
Cc02_g30140 Coffea canephora
CDE04G1157 Ceratophyllum demersum
CDE07G1900 Ceratophyllum demersum
Cfa009894 Carpinus fangiana
Cfa025982 Carpinus fangiana
Ciclev10014592m.g Citrus clementina
CiPaw.14G111400 Carya illinoinensis
ClCG02G022750 Citrullus lanatus
COL.COLO4_16941 Corchorus olitorius
Cpa.g.c26789.1 Carica papaya
Cpa.g.c26789.2 Carica papaya
Cpa.g.sc189.1 Carica papaya
Cre01.g002201 Chlamydomonas reinhardtii
CsaV3_6G038870 Cucumis sativus L.
DCAR_002098 Daucus carota
Dinv36154 Davidia involucrata
Duzib205G1611 Durio zibethinus
ECA238G0396 Erigeron canadensis
EL10Ac4g10101 Beta vulgaris
Eucgr.J00691 Eucalyptus grandis
FAN04G0382 Fragaria x ananassa
FAN08G2618 Fragaria x ananassa
FAN13G1175 Fragaria x ananassa
FAN18G0878 Fragaria x ananassa
FvH4_5g29960 Fragaria vesca
Glyma.02G278500 Glycine max
Glyma.14G036100 Glycine max
Gohir.A03G000034 Gossypium hirsutum
Gohir.D03G176100 Gossypium hirsutum
Gorai.003G185300 Gossypium raimondii
GSVIVG01029300001 Vitis vinifera
GSVIVG01029301001 Vitis vinifera
HanXRQChr14g0432261 Helianthus annuus
Haze_23256 Corylus avellana
Hma1.2p1_0460F.1_g157490 Hydrangea macrophylla
HPP92_019896 Vanilla planifolia
Hund07429 Selenicereus undatus
Hund07432 Selenicereus undatus
Lalb_Chr10g0106191 Lupinus albus
Lj2C487T6 Lonicera japonica
LjContig00564g0003451 Lotus japonicus
Lsat_1_v5_gn_2_33000 Lactuca sativa
Manes.02G136600 Manihot esculenta
Mapoly0027s0150 Marchantia polymorpha
MBI19_g42986_MAGBIO Magnolia biondii
MCO05G618 Micromonas commoda
MD03G1167100 Malus domestica
MD08G1241100 Malus domestica
MD08G1241200 Malus domestica
MD15G1434100 Malus domestica
Medtr5g089190 Medicago truncatula
MELO3C014552.2 Cucumis melo
Migut.A00480 Erythranthe guttata
MSTRG.20931 Avicennia marina
Nitab4.5_0000236g0070 Nicotiana tabacum
Nitab4.5_0000975g0020 Nicotiana tabacum
Nn7g36798 Nelumbo nucifera
Oeu022376.1 Olea europaea
Oeu046802.1 Olea europaea
Oeu046803.1 Olea europaea
Oeu053695.1 Olea europaea
Os12g0189900 Oryza sativa ssp. japonica
Peaxi162Scf00014g00212 Petunia axillaris
PGR119G0699 Punica granatum
PGSC0003DMG400017379 Solanum tuberosum
PGSC0003DMG400035925 Solanum tuberosum
Phvul.008G202300 Phaseolus vulgaris
Potri.001G273600 Populus trichocarpa
Potri.009G067800 Populus trichocarpa
Pp3c25_13080 Physcomitrium patens
Pp3c5_25710 Physcomitrium patens
Prupe.3G132200 Prunus persica
Prupe.4G267500 Prunus persica
Psat2g020920 Pisum sativum
PSO339G4523 Papaver somniferum
PSO384G2750 Papaver somniferum
QL01p016753 Quercus lobata
RcHm_v2.0_Chr7g0223811 Rosa chinensis
Rhsim13G0207500 Rhododendron simsii
Rhsim13G0207600 Rhododendron simsii
Sabra09G0050800 Salix brachista
Sabra16G0168500 Salix brachista
SalBow4G0649 Salvia bowleyana
Sc09g0001090 Simmondsia chinensis
Sc09g0005650 Simmondsia chinensis
Sc09g0005660 Simmondsia chinensis
Sc09g0005670 Simmondsia chinensis
Sc09g0005680 Simmondsia chinensis
Sc09g0005710 Simmondsia chinensis
Sc09g0005720 Simmondsia chinensis
Sc09g0005730 Simmondsia chinensis
Sc09g0005740 Simmondsia chinensis
Sc09g0005750 Simmondsia chinensis
Sed0006572 Sechium edule
SEGI_04037 Sequoiadendron giganteum
SGA_v2.0_scaffold79G25574 Striga asiatica
SGA_v2.0_scaffold96G29125 Striga asiatica
SMO361G0105 Selaginella moellendorffii
Solyc07g045370.3 Solanum lycopersicum
Sopen07g023910 Solanum pennellii
Sp6g31420 Schrenkiella parvula
TAR633G1644 Trochodendron aralioides
TAR636G3031 Trochodendron aralioides
THA.LOC104799141 Tarenaya hassleriana
THA.LOC104816332 Tarenaya hassleriana
Thecc.03G310200 Theobroma cacao
Thhalv10012989m.g Eutrema salsugineum
TPR.G16391 Trifolium pratense
TWI75G0576 Tripterygium wilfordii
unitig_748.g8148 Utricularia gibba
vmacro12803 Vaccinium macrocarpon
VMungo0647G0059 Vigna mungo
Zm00001eb150380 Zea mays

User provided reference genes

Program Settings