Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p44460 Brassica napus
A04p09910 Brassica napus
Aa31sc53G30 Aethionema arabicum
Aa31sc697G10 Aethionema arabicum
Actinidia21452 Actinidia chinensis
Actinidia21453 Actinidia chinensis
Ah.01g002180 Amaranthus hybridus
Ah.06g189600 Amaranthus hybridus
Ah.14g082900 Amaranthus hybridus
AL3G42390 Arabidopsis lyrata
AL7G44580 Arabidopsis lyrata
Aqoxy1G04044 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CR4AH5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V5U7H6 Arachis hypogaea
AT2G04795 Arabidopsis thaliana
AT5G35732 Arabidopsis thaliana
ATR0712G027 Amborella trichopoda
Atru.chr6.3335 Acer truncatum
AUR62000791 Chenopodium quinoa
AUR62005176 Chenopodium quinoa
AUR62015079 Chenopodium quinoa
AUR62017541 Chenopodium quinoa
BcaB08g34491 Brassica carinata
BcaC01g06899 Brassica carinata
BcaC02g09491 Brassica carinata
BolC3t17797H Brassica oleracea
BolC4t25919H Brassica oleracea
BraA03t13579Z Brassica rapa
BraA04t16654Z Brassica rapa
C03p55240 Brassica napus
C04p43410 Brassica napus
CAN.G584.30 Capsicum annuum
CARHR102770 Cardamine hirsuta
CARHR216910 Cardamine hirsuta
Carub.0003s2640 Capsella rubella
Carub.0007s3148 Capsella rubella
Cfa014266 Carpinus fangiana
Ciclev10017035m.g Citrus clementina
CiPaw.03G276700 Carya illinoinensis
ClCG02G002530 Citrullus lanatus
ClCG02G002570 Citrullus lanatus
ClCG02G009450 Citrullus lanatus
COL.COLO4_25851 Corchorus olitorius
Cpa.g.sc136.7 Carica papaya
CsaV3_6G009360 Cucumis sativus L.
CsaV3_7G002850 Cucumis sativus L.
CSS0010457 Camellia sinensis var. sinensis
CSS0040672 Camellia sinensis var. sinensis
CSS0044074 Camellia sinensis var. sinensis
DCAR_012901 Daucus carota
DCAR_021114 Daucus carota
DCAR_032165 Daucus carota
Dinv07836 Davidia involucrata
Duzib133G1369 Durio zibethinus
Duzib138G1375 Durio zibethinus
ECA234G4664 Erigeron canadensis
ECA236G2208 Erigeron canadensis
ECA240G3606 Erigeron canadensis
EL10Ac4g09390 Beta vulgaris
EL10Ac9g22759 Beta vulgaris
Eucgr.K00667 Eucalyptus grandis
FAN02G0634 Fragaria x ananassa
FAN05G2177 Fragaria x ananassa
FvH4_6g41440 Fragaria vesca
Glyma.02G276100 Glycine max
Glyma.13G073800 Glycine max
Glyma.14G039800 Glycine max
Gohir.A07G176012 Gossypium hirsutum
Gohir.A07G189900 Gossypium hirsutum
Gohir.A11G150900 Gossypium hirsutum
Gohir.D07G196100 Gossypium hirsutum
Gohir.D11G157400 Gossypium hirsutum
Gorai.001G194000 Gossypium raimondii
Gorai.001G219600 Gossypium raimondii
Gorai.007G167900 Gossypium raimondii
HanXRQChr03g0075721 Helianthus annuus
HanXRQChr04g0126761 Helianthus annuus
HanXRQChr10g0306371 Helianthus annuus
HanXRQChr17g0535431 Helianthus annuus
Haze_12715 Corylus avellana
Hma1.2p1_0133F.1_g061080 Hydrangea macrophylla
Hma1.2p1_0405F.1_g145660 Hydrangea macrophylla
Hund24140 Selenicereus undatus
Lalb_Chr04g0249481 Lupinus albus
Lalb_Chr19g0125521 Lupinus albus
Lj1g0017552 Lotus japonicus
Lj6g0009976 Lotus japonicus
LjContig00564g0005952 Lotus japonicus
Lsat_1_v5_gn_5_124661 Lactuca sativa
Lsat_1_v5_gn_7_95641 Lactuca sativa
Lsat_1_v5_gn_9_105581 Lactuca sativa
Manes.12G062667 Manihot esculenta
Manes.12G062700 Manihot esculenta
Manes.13G063792 Manihot esculenta
MBI16_g31702_MAGBIO Magnolia biondii
MBI19_g06152_MAGBIO Magnolia biondii
MD09G1119700 Malus domestica
MD17G1110500 Malus domestica
Medtr5g088550 Medicago truncatula
Medtr7g058970 Medicago truncatula
MELO3C018891.2 Cucumis melo
MELO3C019368.2 Cucumis melo
Migut.M00011 Erythranthe guttata
Nitab4.5_0000244g0100 Nicotiana tabacum
Nn1g03285 Nelumbo nucifera
Nn1g07416 Nelumbo nucifera
Oeu012338.1 Olea europaea
Oeu029950.1 Olea europaea
Oeu040478.2 Olea europaea
Peaxi162Scf00942g00037 Petunia axillaris
Peaxi162Scf32072g00001 Petunia axillaris
PGR142G3730 Punica granatum
Phvul.006G020400 Phaseolus vulgaris
Phvul.008G205400 Phaseolus vulgaris
Potri.002G222900 Populus trichocarpa
Potri.014G162400 Populus trichocarpa
Prupe.3G204400 Prunus persica
PSO541G4821 Papaver somniferum
PSO675G4632 Papaver somniferum
QL08p029214 Quercus lobata
RcHm_v2.0_Chr2g0156971 Rosa chinensis
Rhsim04G0044800 Rhododendron simsii
Rhsim06G0172200 Rhododendron simsii
Rhsim06G0172300 Rhododendron simsii
Sabra14G0124000 Salix brachista
Sc06g0009750 Simmondsia chinensis
Sc21g0000930 Simmondsia chinensis
Sed0002977 Sechium edule
Sed0012024 Sechium edule
Sed0014772 Sechium edule
Sed0026674 Sechium edule
Solyc07g006590.1 Solanum lycopersicum
Sopen07g002670 Solanum pennellii
Sp3g23410 Schrenkiella parvula
Sp7g06500 Schrenkiella parvula
TAR624G1342 Trochodendron aralioides
TAR629G0945 Trochodendron aralioides
THA.LOC104808855 Tarenaya hassleriana
THA.LOC104826613 Tarenaya hassleriana
Thecc.01G187900 Theobroma cacao
TPR.G12632 Trifolium pratense
TPR.G14637 Trifolium pratense
TWI36G0863 Tripterygium wilfordii
vmacro12127 Vaccinium macrocarpon
vmacro12128 Vaccinium macrocarpon
VMungo0647G0767 Vigna mungo

User provided reference genes

Program Settings