Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p05810 Brassica napus
A06p26660 Brassica napus
A08p18120 Brassica napus
Aa31LG4G11720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.408 Anthoceros agrestis
Actinidia13280 Actinidia chinensis
Actinidia13281 Actinidia chinensis
Actinidia13429 Actinidia chinensis
Ah.10g025860 Amaranthus hybridus
AL7G19190 Arabidopsis lyrata
Aqoxy7G01897 Aquilegia oxysepala
Aqoxy81s001 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.29TRSQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WUI646 Arachis hypogaea
AT4G32570 Arabidopsis thaliana
ATR0083G007 Amborella trichopoda
Atru.chr7.2334 Acer truncatum
AUR62024850 Chenopodium quinoa
BcaB03g12752 Brassica carinata
BcaC01g01013 Brassica carinata
BcaC08g44885 Brassica carinata
BcaC09g52048 Brassica carinata
BolC1t00634H Brassica oleracea
BolC3t21027H Brassica oleracea
BolC7t44052H Brassica oleracea
BolC9t58511H Brassica oleracea
BraA01t00550Z Brassica rapa
BraA08t33764Z Brassica rapa
C01p06380 Brassica napus
C03p87260 Brassica napus
C07p35200 Brassica napus
CAN.G199.28 Capsicum annuum
CANSAT25G3062 Cannabis sativa
CARHR240540 Cardamine hirsuta
CARHR240550 Cardamine hirsuta
Carub.0007s0798 Capsella rubella
Ca_15703_v3 Cicer arietinum L.
Cc08_g08010 Coffea canephora
Cfa021484 Carpinus fangiana
Ciclev10008356m.g Citrus clementina
CiPaw.07G218200 Carya illinoinensis
CiPaw.08G014900 Carya illinoinensis
ClCG05G017130 Citrullus lanatus
ClCG08G012940 Citrullus lanatus
COL.COLO4_24046 Corchorus olitorius
Cpa.g.sc91.20 Carica papaya
Cpa.g.sc91.24 Carica papaya
CsaV3_2G031660 Cucumis sativus L.
CsaV3_3G046630 Cucumis sativus L.
CSS0000568 Camellia sinensis var. sinensis
DCAR_022871 Daucus carota
Dinv07115 Davidia involucrata
Dinv11587 Davidia involucrata
Dinv30204 Davidia involucrata
Duzib150G1154 Durio zibethinus
Duzib168G0094 Durio zibethinus
Duzib187G0541 Durio zibethinus
ECA233G0036 Erigeron canadensis
EL10Ac2g02550 Beta vulgaris
Eucgr.C01809 Eucalyptus grandis
FAN15G0409 Fragaria x ananassa
FAN20G1096 Fragaria x ananassa
FAN24G3348 Fragaria x ananassa
FAN27G2430 Fragaria x ananassa
FvH4_2g30050 Fragaria vesca
Glyma.04G071400 Glycine max
Glyma.06G072700 Glycine max
Glyma.17G205200 Glycine max
Gohir.A05G010100 Gossypium hirsutum
Gohir.D05G010800 Gossypium hirsutum
Gorai.009G011200 Gossypium raimondii
GSVIVG01035797001 Vitis vinifera
HanXRQChr02g0050641 Helianthus annuus
HanXRQChr13g0402161 Helianthus annuus
Haze_10527 Corylus avellana
Haze_21614 Corylus avellana
Hma1.2p1_0175F.1_g077130 Hydrangea macrophylla
HPP92_009098 Vanilla planifolia
Lalb_Chr08g0243831 Lupinus albus
Lalb_Chr23g0268881 Lupinus albus
Lj1g0018494 Lotus japonicus
Lj7A714G44 Lonicera japonica
Lj7C714T1 Lonicera japonica
Lsat_1_v5_gn_1_43100 Lactuca sativa
Lsat_1_v5_gn_6_22941 Lactuca sativa
Manes.03G065500 Manihot esculenta
Manes.16G067800 Manihot esculenta
Mapoly0079s0053 Marchantia polymorpha
MBI01_g37337_MAGBIO Magnolia biondii
MBI04_g39529_MAGBIO Magnolia biondii
MD08G1137500 Malus domestica
MD15G1116100 Malus domestica
Medtr3g107950 Medicago truncatula
Medtr4g013390 Medicago truncatula
MELO3C003675.2 Cucumis melo
MELO3C011217.2 Cucumis melo
Migut.A00282 Erythranthe guttata
MSTRG.25868 Avicennia marina
Nitab4.5_0005873g0030 Nicotiana tabacum
Nitab4.5_0011669g0010 Nicotiana tabacum
Nn2g11855 Nelumbo nucifera
Nn8g39307 Nelumbo nucifera
Oeu014659.3 Olea europaea
Oeu032487.3 Olea europaea
Peaxi162Scf00545g00034 Petunia axillaris
PGR031G2456 Punica granatum
PGSC0003DMG400026089 Solanum tuberosum
Phvul.001G055100 Phaseolus vulgaris
Phvul.009G097300 Phaseolus vulgaris
Potri.006G247500 Populus trichocarpa
Potri.018G033700 Populus trichocarpa
Pp3c19_8700 Physcomitrium patens
Pp3c22_12420 Physcomitrium patens
Prupe.1G467500 Prunus persica
Psat0s1782g0240 Pisum sativum
PSO063G0687 Papaver somniferum
PSO782G1260 Papaver somniferum
QL12p031441 Quercus lobata
RcHm_v2.0_Chr6g0312851 Rosa chinensis
Rhsim02G0188600 Rhododendron simsii
Sabra06G0193700 Salix brachista
Sabra18G0034600 Salix brachista
SalBow4G0713 Salvia bowleyana
Sed0000645 Sechium edule
Sed0008448 Sechium edule
SEGI_09816 Sequoiadendron giganteum
SEGI_18535 Sequoiadendron giganteum
SGA_v2.0_scaffold27G11478 Striga asiatica
SHI18604 Sapria himalayana
SMO143G0273 Selaginella moellendorffii
Solyc06g065650.3 Solanum lycopersicum
Sopen06g024010 Solanum pennellii
Sp7g30350 Schrenkiella parvula
TAR383G0458 Trochodendron aralioides
TAR626G1320 Trochodendron aralioides
TAR636G0300 Trochodendron aralioides
THA.LOC104803820 Tarenaya hassleriana
Thecc.09G145300 Theobroma cacao
Thhalv10025562m.g Eutrema salsugineum
TPR.G34685 Trifolium pratense
TWI32G0021 Tripterygium wilfordii
TWI34G0135 Tripterygium wilfordii
unitig_37.g12225 Utricularia gibba
unitig_46.g18533 Utricularia gibba
vmacro11124 Vaccinium macrocarpon
VMungo1309G3073 Vigna mungo

User provided reference genes

Program Settings