Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p37550 Brassica napus
A05p37100 Brassica napus
Aa31LG3G6480 Aethionema arabicum
Actinidia34769 Actinidia chinensis
Actinidia38920 Actinidia chinensis
Ah.10g030100 Amaranthus hybridus
Ah.12g059980 Amaranthus hybridus
AL3G23920 Arabidopsis lyrata
Aqoxy2G00421 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EVE7SV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K7P4IE Arachis hypogaea
AT3G12260 Arabidopsis thaliana
ATR1096G082 Amborella trichopoda
Atru.chr12.1279 Acer truncatum
AUR62031745 Chenopodium quinoa
AUR62032630 Chenopodium quinoa
AUR62042115 Chenopodium quinoa
BcaB04g18689 Brassica carinata
BcaC01g04057 Brassica carinata
BcaC09g48226 Brassica carinata
BolC1t05249H Brassica oleracea
BolC3t16831H Brassica oleracea
BolC5t34219H Brassica oleracea
BraA03t12909Z Brassica rapa
BraA05t22507Z Brassica rapa
C01p53060 Brassica napus
C03p45540 Brassica napus
C05p55530 Brassica napus
CAN.G1362.7 Capsicum annuum
CAN.G575.4 Capsicum annuum
CANSAT56G0322 Cannabis sativa
CARHR086810 Cardamine hirsuta
Carub.0003s1162 Capsella rubella
Ca_23972_v3 Cicer arietinum L.
CBR_g52457 Chara braunii
Cc07_g21240 Coffea canephora
CDE04G1620 Ceratophyllum demersum
Cfa010943 Carpinus fangiana
Ciclev10002826m.g Citrus clementina
CiPaw.13G015300 Carya illinoinensis
CiPaw.14G008900 Carya illinoinensis
ClCG00G004230 Citrullus lanatus
ClCG05G026940 Citrullus lanatus
ClCG05G026950 Citrullus lanatus
COL.COLO4_20705 Corchorus olitorius
COL.COLO4_20706 Corchorus olitorius
Cpa.g.sc169.49 Carica papaya
Cre12.g555250 Chlamydomonas reinhardtii
CsaV3_5G036890 Cucumis sativus L.
CSS0020361 Camellia sinensis var. sinensis
DCAR_029715 Daucus carota
Dinv44706 Davidia involucrata
Duzib114G0920 Durio zibethinus
Duzib128G1035 Durio zibethinus
ECA248G2587 Erigeron canadensis
EL10Ac2g02769 Beta vulgaris
Eucgr.G03216 Eucalyptus grandis
FAN03G2670 Fragaria x ananassa
FAN06G4838 Fragaria x ananassa
FAN10G0593 Fragaria x ananassa
FAN10G2449 Fragaria x ananassa
FvH4_7g03540 Fragaria vesca
Glyma.09G091002 Glycine max
Glyma.13G193600 Glycine max
Glyma.15G231900 Glycine max
Gohir.A10G188000 Gossypium hirsutum
Gohir.A10G188200 Gossypium hirsutum
Gohir.D03G123000 Gossypium hirsutum
Gohir.D10G195900 Gossypium hirsutum
Gorai.004G120800 Gossypium raimondii
Gorai.011G218700 Gossypium raimondii
GSVIVG01036643001 Vitis vinifera
HanXRQChr11g0341771 Helianthus annuus
Haze_03004 Corylus avellana
Hma1.2p1_0837F.1_g226140 Hydrangea macrophylla
HPP92_021197 Vanilla planifolia
Hund13385 Selenicereus undatus
Hund15745 Selenicereus undatus
Lalb_Chr03g0032141 Lupinus albus
Lalb_Chr19g0132971 Lupinus albus
Lalb_Chr19g0132981 Lupinus albus
Lj2A602G38 Lonicera japonica
Lj3g0022103 Lotus japonicus
Lsat_1_v5_gn_1_116501 Lactuca sativa
Manes.04G157100 Manihot esculenta
Manes.11G007200 Manihot esculenta
Mapoly0055s0110 Marchantia polymorpha
MBI13_g09225_MAGBIO Magnolia biondii
MCO10G366 Micromonas commoda
MD02G1279300 Malus domestica
MD07G1046900 Malus domestica
MD07G1047200 Malus domestica
Medtr8g040150 Medicago truncatula
MELO3C012486.2 Cucumis melo
Migut.N01855 Erythranthe guttata
MSTRG.5074 Avicennia marina
Nitab4.5_0000254g0180 Nicotiana tabacum
Nitab4.5_0004389g0010 Nicotiana tabacum
Nitab4.5_0010402g0010 Nicotiana tabacum
Nn7g36804 Nelumbo nucifera
Oeu064133.1 Olea europaea
Os07g0640100 Oryza sativa ssp. japonica
Peaxi162Scf00062g02216 Petunia axillaris
Peaxi162Scf01042g00115 Petunia axillaris
PGR044G2178 Punica granatum
PGSC0003DMG400003395 Solanum tuberosum
PGSC0003DMG400004276 Solanum tuberosum
PGSC0003DMG400005271 Solanum tuberosum
PGSC0003DMG401025557 Solanum tuberosum
Phvul.011G203300 Phaseolus vulgaris
Potri.001G029900 Populus trichocarpa
Pp3c1_37620 Physcomitrium patens
Pp3c2_3180 Physcomitrium patens
Prupe.2G041500 Prunus persica
Psat4g099920 Pisum sativum
PSO135G0826 Papaver somniferum
PSO384G1335 Papaver somniferum
QL04p018722 Quercus lobata
RcHm_v2.0_Chr1g0325871 Rosa chinensis
RcHm_v2.0_Chr1g0325941 Rosa chinensis
Rhsim09G0131900 Rhododendron simsii
Sabra01G0021400 Salix brachista
SalBow5G1163 Salvia bowleyana
Sc10g0004520 Simmondsia chinensis
Sed0002262 Sechium edule
SEGI_02182 Sequoiadendron giganteum
SEGI_36145 Sequoiadendron giganteum
SGA_v2.0_scaffold232G43489 Striga asiatica
SGA_v2.0_scaffold43G16284 Striga asiatica
SMO364G0517 Selaginella moellendorffii
Solyc01g022750.3 Solanum lycopersicum
Sopen01g016660 Solanum pennellii
Sp3g10480 Schrenkiella parvula
TAR362G0697 Trochodendron aralioides
THA.LOC104799320 Tarenaya hassleriana
THA.LOC104826756 Tarenaya hassleriana
Thecc.10G149000 Theobroma cacao
Thhalv10021751m.g Eutrema salsugineum
TPR.G8538 Trifolium pratense
TWI38G0338 Tripterygium wilfordii
TWI74G0500 Tripterygium wilfordii
unitig_899.g15579 Utricularia gibba
vmacro10390 Vaccinium macrocarpon
VMungo0464G2031 Vigna mungo
VMungo1127G1184 Vigna mungo
Zm00001eb001400 Zea mays

User provided reference genes

Program Settings