Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p08280 Brassica napus
Aa31LG6G8420 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1441 Anthoceros agrestis
Actinidia32879 Actinidia chinensis
AL1G48900 Arabidopsis lyrata
Aqoxy5G03157 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2D5YI2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.84LCSI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A3G9LL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JHS45V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q8YEUU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RF3N8D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T3MISZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T6GVNL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UQ6TGS Arachis hypogaea
AT1G34350 Arabidopsis thaliana
ATR0584G018 Amborella trichopoda
Atru.chr13.1812 Acer truncatum
AUR62004663 Chenopodium quinoa
AUR62023580 Chenopodium quinoa
BcaB03g13677 Brassica carinata
BcaB04g17880 Brassica carinata
BcaB07g33131 Brassica carinata
BcaC05g27759 Brassica carinata
BcaC08g43783 Brassica carinata
BolC5t32496H Brassica oleracea
BolC6t36295H Brassica oleracea
BolC8t47866H Brassica oleracea
BraA08t32846Z Brassica rapa
BraA09t38755Z Brassica rapa
BraA09t38756Z Brassica rapa
C05p37550 Brassica napus
C06p11610 Brassica napus
CAN.G21.12 Capsicum annuum
CAN.G623.4 Capsicum annuum
CANSAT25G3131 Cannabis sativa
CANSAT64G0780 Cannabis sativa
CARHR033800 Cardamine hirsuta
Carub.0001s3248 Capsella rubella
Ca_16220_v3 Cicer arietinum L.
Cc10_g11140 Coffea canephora
CDE05G2425 Ceratophyllum demersum
Cfa018205 Carpinus fangiana
Ciclev10002730m.g Citrus clementina
CiPaw.15G082700 Carya illinoinensis
ClCG02G007860 Citrullus lanatus
COL.COLO4_35446 Corchorus olitorius
Cpa.g.sc66.58 Carica papaya
Cre02.g142150 Chlamydomonas reinhardtii
CsaV3_2G035870 Cucumis sativus L.
CSS0031544 Camellia sinensis var. sinensis
CSS0044586 Camellia sinensis var. sinensis
CSS0049152 Camellia sinensis var. sinensis
DCAR_006419 Daucus carota
Dinv30978 Davidia involucrata
Dinv41687 Davidia involucrata
Duzib116G0364 Durio zibethinus
Duzib177G1119 Durio zibethinus
ECA248G1561 Erigeron canadensis
EL10Ac1g00786 Beta vulgaris
Eucgr.F04136 Eucalyptus grandis
FAN20G1842 Fragaria x ananassa
FAN27G0578 Fragaria x ananassa
FvH4_2g12231 Fragaria vesca
Glyma.02G074600 Glycine max
Glyma.09G166500 Glycine max
Glyma.16G156600 Glycine max
Glyma.16G216600 Glycine max
Gohir.A05G250700 Gossypium hirsutum
Gohir.D05G253100 Gossypium hirsutum
Gorai.009G263900 Gossypium raimondii
GSVIVG01023270001 Vitis vinifera
HanXRQChr01g0027021 Helianthus annuus
Haze_17904 Corylus avellana
HPP92_025038 Vanilla planifolia
Hund16805 Selenicereus undatus
Hund27077 Selenicereus undatus
Lalb_Chr01g0009971 Lupinus albus
Lalb_Chr03g0035851 Lupinus albus
Lj1g0006567 Lotus japonicus
Lj7C297T10 Lonicera japonica
Lj7P297T42 Lonicera japonica
Lsat_1_v5_gn_1_53501 Lactuca sativa
Manes.02G220500 Manihot esculenta
Mapoly0118s0004 Marchantia polymorpha
MCO05G717 Micromonas commoda
MD05G1040400 Malus domestica
MD10G1046500 Malus domestica
Medtr3g078663 Medicago truncatula
MELO3C024753.2 Cucumis melo
Migut.N03340 Erythranthe guttata
MSTRG.22441 Avicennia marina
Nitab4.5_0000125g0160 Nicotiana tabacum
Nitab4.5_0006579g0080 Nicotiana tabacum
Nn5g27795 Nelumbo nucifera
Oeu021007.1 Olea europaea
Oeu039592.1 Olea europaea
Os05g0432500 Oryza sativa ssp. japonica
Os08g0104100 Oryza sativa ssp. japonica
Peaxi162Scf00020g02234 Petunia axillaris
Peaxi162Scf00105g01425 Petunia axillaris
PGR004G0411 Punica granatum
PGSC0003DMG400033629 Solanum tuberosum
Phvul.004G084500 Phaseolus vulgaris
Potri.013G114800 Populus trichocarpa
Potri.019G085500 Populus trichocarpa
Pp3c12_6500 Physcomitrium patens
Prupe.8G054100 Prunus persica
Psat5g109360 Pisum sativum
PSO063G4111 Papaver somniferum
PSO210G7193 Papaver somniferum
PSO238G0018 Papaver somniferum
QL02p034100 Quercus lobata
QL02p034107 Quercus lobata
RcHm_v2.0_Chr6g0272201 Rosa chinensis
Rhsim06G0097400 Rhododendron simsii
Sabra13G0097100 Salix brachista
SalBow6G2431 Salvia bowleyana
SalBow6G5561 Salvia bowleyana
Sc01g0001710 Simmondsia chinensis
Sed0020054 Sechium edule
SEGI_32859 Sequoiadendron giganteum
SEGI_32911 Sequoiadendron giganteum
SGA_v2.0_scaffold1053G53813 Striga asiatica
SGA_v2.0_scaffold149G36609 Striga asiatica
SGA_v2.0_scaffold386G50489 Striga asiatica
SGA_v2.0_scaffold483G52344 Striga asiatica
SMO115G0137 Selaginella moellendorffii
SMO304G0014 Selaginella moellendorffii
Solyc08g067830.3 Solanum lycopersicum
Sopen08g021770 Solanum pennellii
Sp1g29570 Schrenkiella parvula
TAR628G0708 Trochodendron aralioides
THA.LOC104806781 Tarenaya hassleriana
THA.LOC104813096 Tarenaya hassleriana
Thecc.08G201900 Theobroma cacao
Thhalv10008956m.g Eutrema salsugineum
TPR.G27590 Trifolium pratense
TWI32G0414 Tripterygium wilfordii
TWI34G1514 Tripterygium wilfordii
unitig_52.g17664 Utricularia gibba
unitig_62.g23355 Utricularia gibba
vmacro12499 Vaccinium macrocarpon
VMungo0464G1968 Vigna mungo
Zm00001eb174480 Zea mays
Zm00001eb289230 Zea mays

User provided reference genes

Program Settings