Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG1G2990 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.532 Anthoceros agrestis
Actinidia00512 Actinidia chinensis
Ah.01g016850 Amaranthus hybridus
AL1G22940 Arabidopsis lyrata
Aqoxy5G01670 Aquilegia oxysepala
AT1G11760 Arabidopsis thaliana
ATR1120G109 Amborella trichopoda
Atru.chr5.2947 Acer truncatum
Atru.chr8.1229 Acer truncatum
AUR62023928 Chenopodium quinoa
AUR62038311 Chenopodium quinoa
BcaB03g13232 Brassica carinata
BcaB08g37416 Brassica carinata
CAN.G1312.12 Capsicum annuum
CAN.G1435.13 Capsicum annuum
CANSAT11G0677 Cannabis sativa
CARHR012080 Cardamine hirsuta
Carub.0001s1142 Capsella rubella
Ca_15377_v3 Cicer arietinum L.
Cc02_g17760 Coffea canephora
Cc02_g20820 Coffea canephora
CDE02G3080 Ceratophyllum demersum
Cfa005022 Carpinus fangiana
Ciclev10029521m.g Citrus clementina
CiPaw.05G062700 Carya illinoinensis
CiPaw.06G136800 Carya illinoinensis
ClCG11G004520 Citrullus lanatus
COL.COLO4_32439 Corchorus olitorius
COL.COLO4_32440 Corchorus olitorius
Cpa.g.sc31.66 Carica papaya
CsaV3_2G014570 Cucumis sativus L.
CSS0002049 Camellia sinensis var. sinensis
CSS0016345 Camellia sinensis var. sinensis
CSS0021040 Camellia sinensis var. sinensis
CSS0025161 Camellia sinensis var. sinensis
CSS0049550 Camellia sinensis var. sinensis
DCAR_026977 Daucus carota
Dinv23543 Davidia involucrata
Dinv42084 Davidia involucrata
Duzib132G0024 Durio zibethinus
ECA233G0803 Erigeron canadensis
ECA236G0931 Erigeron canadensis
EL10Ac1g02225 Beta vulgaris
EL10Ac7g17776 Beta vulgaris
EL10Ac9g21088 Beta vulgaris
Eucgr.G00447 Eucalyptus grandis
Eucgr.I01257 Eucalyptus grandis
FAN15G2434 Fragaria x ananassa
FAN24G0166 Fragaria x ananassa
FAN27G1698 Fragaria x ananassa
FvH4_2g08450 Fragaria vesca
FvH4_5g34112 Fragaria vesca
Glyma.04G123300 Glycine max
Glyma.09G214900 Glycine max
Gohir.A03G179300 Gossypium hirsutum
Gohir.A03G179400 Gossypium hirsutum
Gohir.A12G017900 Gossypium hirsutum
Gohir.D02G202838 Gossypium hirsutum
Gohir.D02G202857 Gossypium hirsutum
Gohir.D12G018500 Gossypium hirsutum
Gorai.005G228100 Gossypium raimondii
Gorai.005G228200 Gossypium raimondii
Gorai.008G018800 Gossypium raimondii
HanXRQChr05g0152051 Helianthus annuus
Haze_02365 Corylus avellana
Hma1.2p1_0854F.1_g228935 Hydrangea macrophylla
Hma1.2p1_1375F.1_g278970 Hydrangea macrophylla
Hma1.2p1_2665F.1_g326510 Hydrangea macrophylla
Hma1.2p1_3179F.1_g333696 Hydrangea macrophylla
HPP92_013432 Vanilla planifolia
HPP92_014777 Vanilla planifolia
HPP92_027116 Vanilla planifolia
Hund22263 Selenicereus undatus
Lalb_Chr19g0138591 Lupinus albus
Lalb_Chr23g0265461 Lupinus albus
Lj3g0003138 Lotus japonicus
Lj4g0027023 Lotus japonicus
Lj5P199T42 Lonicera japonica
Lsat_1_v5_gn_7_89621 Lactuca sativa
Manes.17G099700 Manihot esculenta
Mapoly0003s0019 Marchantia polymorpha
MBI16_g37741_MAGBIO Magnolia biondii
MD05G1068400 Malus domestica
MD10G1078600 Malus domestica
Medtr3g116260 Medicago truncatula
Medtr3g116310 Medicago truncatula
MELO3C020986.2 Cucumis melo
Migut.B00252 Erythranthe guttata
MSTRG.16796 Avicennia marina
Nitab4.5_0002541g0070 Nicotiana tabacum
Nitab4.5_0002601g0030 Nicotiana tabacum
Nitab4.5_0009564g0010 Nicotiana tabacum
Nitab4.5_0012262g0010 Nicotiana tabacum
Nn1g02125 Nelumbo nucifera
Nn1g05055 Nelumbo nucifera
Oeu014337.1 Olea europaea
Oeu014338.1 Olea europaea
Os10g0548400 Oryza sativa ssp. japonica
Peaxi162Scf00316g00313 Petunia axillaris
Peaxi162Scf00346g00043 Petunia axillaris
PGR042G3747 Punica granatum
PGSC0003DMG400026262 Solanum tuberosum
Phvul.002G127500 Phaseolus vulgaris
Potri.004G152700 Populus trichocarpa
Pp3c10_12480 Physcomitrium patens
Prupe.5G020100 Prunus persica
Prupe.8G100500 Prunus persica
Psat4g095600 Pisum sativum
Psat5g007800 Pisum sativum
Psat5g103000 Pisum sativum
PSO170G5319 Papaver somniferum
PSO700G0271 Papaver somniferum
QL11p043069 Quercus lobata
RcHm_v2.0_Chr6g0263731 Rosa chinensis
RcHm_v2.0_Chr6g0264001 Rosa chinensis
Rhsim11G0174400 Rhododendron simsii
SalBow6G1117 Salvia bowleyana
SalBow6G6037 Salvia bowleyana
Sc09g0004030 Simmondsia chinensis
Sc09g0004050 Simmondsia chinensis
Sed0024996 Sechium edule
SGA_v2.0_scaffold106G30693 Striga asiatica
SHI23962 Sapria himalayana
SMO174G0113 Selaginella moellendorffii
Solyc08g078240.4 Solanum lycopersicum
Solyc09g082740.1 Solanum lycopersicum
Solyc09g082750.1 Solanum lycopersicum
Sopen08g026750 Solanum pennellii
Sopen09g031600 Solanum pennellii
Sp1g10380 Schrenkiella parvula
Sp2g23220 Schrenkiella parvula
TAR625G1013 Trochodendron aralioides
TAR628G0554 Trochodendron aralioides
TAR628G1226 Trochodendron aralioides
THA.LOC104823526 Tarenaya hassleriana
Thecc.02G123800 Theobroma cacao
Thecc.02G123900 Theobroma cacao
Thhalv10008721m.g Eutrema salsugineum
TPR.G21542 Trifolium pratense
TWI31G0294 Tripterygium wilfordii
TWI79G0765 Tripterygium wilfordii
unitig_37.g12818 Utricularia gibba
vmacro08119 Vaccinium macrocarpon
VMungo1215G0362 Vigna mungo
Zm00001eb284000 Zea mays

User provided reference genes

Program Settings