Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG2G12350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1164 Anthoceros agrestis
Actinidia01853 Actinidia chinensis
Actinidia04451 Actinidia chinensis
Actinidia34743 Actinidia chinensis
Actinidia38945 Actinidia chinensis
Ah.04g155980 Amaranthus hybridus
Ah.06g191930 Amaranthus hybridus
AL3G53380 Arabidopsis lyrata
Aqoxy2G03635 Aquilegia oxysepala
Aqoxy5G00231 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JQR6X4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MCCA8X Arachis hypogaea
AT2G20410 Arabidopsis thaliana
ATR0598G211 Amborella trichopoda
ATR0730G220 Amborella trichopoda
Atru.chr6.1561 Acer truncatum
AUR62002121 Chenopodium quinoa
AUR62004857 Chenopodium quinoa
AUR62028240 Chenopodium quinoa
AUR62040940 Chenopodium quinoa
BcaB04g20137 Brassica carinata
BcaC09g49624 Brassica carinata
BolC1t03407H Brassica oleracea
C01p34370 Brassica napus
CAN.G793.55 Capsicum annuum
CAN.G793.56 Capsicum annuum
CANSAT54G0719 Cannabis sativa
CARHR110960 Cardamine hirsuta
Carub.0003s3480 Capsella rubella
Ca_10010_v3 Cicer arietinum L.
Ca_17181_v3 Cicer arietinum L.
Cc03_g05430 Coffea canephora
CDE02G0996 Ceratophyllum demersum
CDE06G2699 Ceratophyllum demersum
Ciclev10001967m.g Citrus clementina
CiPaw.08G117800 Carya illinoinensis
ClCG02G016990 Citrullus lanatus
COL.COLO4_15462 Corchorus olitorius
Cpa.g.sc162.33 Carica papaya
Cre16.g655100 Chlamydomonas reinhardtii
CsaV3_2G003750 Cucumis sativus L.
CSS0005455 Camellia sinensis var. sinensis
DCAR_002321 Daucus carota
Dinv14615 Davidia involucrata
Dinv29871 Davidia involucrata
Duzib177G0085 Durio zibethinus
Duzib177G1154 Durio zibethinus
ECA240G2747 Erigeron canadensis
EL10Ac3g05020 Beta vulgaris
EL10Ac4g09067 Beta vulgaris
Eucgr.H04247 Eucalyptus grandis
Eucgr.H04250 Eucalyptus grandis
Eucgr.H04252 Eucalyptus grandis
Eucgr.H04277 Eucalyptus grandis
Eucgr.H04279 Eucalyptus grandis
Eucgr.H04286 Eucalyptus grandis
Eucgr.H04289 Eucalyptus grandis
FAN02G2775 Fragaria x ananassa
FAN05G3609 Fragaria x ananassa
FAN05G5817 Fragaria x ananassa
FAN06G2241 Fragaria x ananassa
FAN09G4497 Fragaria x ananassa
FAN14G0587 Fragaria x ananassa
FAN14G5434 Fragaria x ananassa
FvH4_6g02180 Fragaria vesca
Glyma.10G166800 Glycine max
Glyma.20G222300 Glycine max
Gohir.A13G168200 Gossypium hirsutum
Gohir.D13G173500 Gossypium hirsutum
Gorai.013G187000 Gossypium raimondii
GSVIVG01027796001 Vitis vinifera
GSVIVG01027798001 Vitis vinifera
GSVIVG01036192001 Vitis vinifera
HanXRQChr03g0091791 Helianthus annuus
HanXRQChr08g0233311 Helianthus annuus
Haze_04438 Corylus avellana
Hma1.2p1_1006F.1_g247010 Hydrangea macrophylla
HPP92_015212 Vanilla planifolia
HPP92_015224 Vanilla planifolia
HPP92_025481 Vanilla planifolia
Hund03036 Selenicereus undatus
Hund06912 Selenicereus undatus
Lalb_Chr02g0149171 Lupinus albus
Lj3A700T11 Lonicera japonica
Lj5g0005697 Lotus japonicus
Lsat_1_v5_gn_3_118860 Lactuca sativa
Manes.08G138000 Manihot esculenta
Manes.09G148800 Manihot esculenta
Manes.15G040000 Manihot esculenta
Mapoly0025s0138 Marchantia polymorpha
MBI18_g13184_MAGBIO Magnolia biondii
MD04G1229000 Malus domestica
MD12G1246100 Malus domestica
Medtr1g079925 Medicago truncatula
MELO3C004420.2 Cucumis melo
Migut.N00267 Erythranthe guttata
MSTRG.21911 Avicennia marina
Nitab4.5_0000044g0220 Nicotiana tabacum
Nitab4.5_0011884g0010 Nicotiana tabacum
Nn1g02742 Nelumbo nucifera
Oeu028977.1 Olea europaea
Os03g0860000 Oryza sativa ssp. japonica
Peaxi162Scf00409g00421 Petunia axillaris
PGR004G2085 Punica granatum
PGSC0003DMG400017174 Solanum tuberosum
Phvul.L001688 Phaseolus vulgaris
Potri.013G045800 Populus trichocarpa
Potri.019G017900 Populus trichocarpa
Prupe.6G348800 Prunus persica
Psat6g143200 Pisum sativum
PSO170G6910 Papaver somniferum
PSO173G0035 Papaver somniferum
QL03p031652 Quercus lobata
QL09p031144 Quercus lobata
RcHm_v2.0_Chr3g0449951 Rosa chinensis
RcHm_v2.0_Chr6g0274061 Rosa chinensis
Rhsim04G0183700 Rhododendron simsii
Rhsim13G0009400 Rhododendron simsii
Sabra13G0042100 Salix brachista
SalBow3G1367 Salvia bowleyana
Sc09g0004160 Simmondsia chinensis
Sed0011924 Sechium edule
Sed0016660 Sechium edule
SEGI_05528 Sequoiadendron giganteum
SEGI_11048 Sequoiadendron giganteum
SGA_v2.0_scaffold308G48086 Striga asiatica
SHI23170 Sapria himalayana
SMO367G0112 Selaginella moellendorffii
Solyc09g090050.4 Solanum lycopersicum
Sopen09g032960 Solanum pennellii
SpUn0001_1010 Schrenkiella parvula
TAR365G0228 Trochodendron aralioides
TAR636G3303 Trochodendron aralioides
THA.LOC104807079 Tarenaya hassleriana
Thecc.05G272900 Theobroma cacao
Thhalv10027851m.g Eutrema salsugineum
TPR.G32267 Trifolium pratense
TWI63G1834 Tripterygium wilfordii
unitig_0.g910 Utricularia gibba
vmacro02443 Vaccinium macrocarpon
vmacro02444 Vaccinium macrocarpon
vmacro08495 Vaccinium macrocarpon
VMungo0720G0573 Vigna mungo
VMungo0720G1819 Vigna mungo
Zm00001eb210280 Zea mays

User provided reference genes

Program Settings