Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p30550 Brassica napus
A04p07040 Brassica napus
Aa31LG10G7440 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2339 Anthoceros agrestis
Actinidia37756 Actinidia chinensis
Ah.12g059320 Amaranthus hybridus
AL5G33050 Arabidopsis lyrata
Aqoxy2G00625 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.275XDC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X3LXDK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y0MH84 Arachis hypogaea
AT3G52390 Arabidopsis thaliana
ATR0697G267 Amborella trichopoda
Atru.chr8.1330 Acer truncatum
AUR62030719 Chenopodium quinoa
AUR62036353 Chenopodium quinoa
BcaB02g08573 Brassica carinata
BcaC02g09261 Brassica carinata
BolC1t02473H Brassica oleracea
BolC4t25644H Brassica oleracea
BraA01t03187Z Brassica rapa
BraA04t16401Z Brassica rapa
C04p40630 Brassica napus
CAN.G741.26 Capsicum annuum
CAN.G869.8 Capsicum annuum
CANSAT64G0057 Cannabis sativa
CARHR162160 Cardamine hirsuta
Carub.0005s1875 Capsella rubella
Ca_09063_v3 Cicer arietinum L.
CBR_g41666 Chara braunii
Cc04_g12370 Coffea canephora
Cc06_g06690 Coffea canephora
Cc08_g12120 Coffea canephora
CDE09G0133 Ceratophyllum demersum
Ciclev10012219m.g Citrus clementina
CiPaw.10G018800 Carya illinoinensis
ClCG10G018240 Citrullus lanatus
COL.COLO4_29542 Corchorus olitorius
Cpa.g.sc104.11 Carica papaya
Cre02.g085650 Chlamydomonas reinhardtii
Cre03.g169800 Chlamydomonas reinhardtii
CsaV3_3G038080 Cucumis sativus L.
CSS0022283 Camellia sinensis var. sinensis
DCAR_009180 Daucus carota
Dinv12349 Davidia involucrata
Duzib128G0735 Durio zibethinus
ECA233G5535 Erigeron canadensis
EL10Ac5g11853 Beta vulgaris
Eucgr.A02573 Eucalyptus grandis
FAN02G0570 Fragaria x ananassa
FAN05G1272 Fragaria x ananassa
FAN05G3424 Fragaria x ananassa
FAN14G5766 Fragaria x ananassa
FvH4_2g19461 Fragaria vesca
FvH4_6g20480 Fragaria vesca
Glyma.19G200600 Glycine max
Gohir.A05G372400 Gossypium hirsutum
Gohir.A09G012800 Gossypium hirsutum
Gohir.A09G133400 Gossypium hirsutum
Gohir.A13G054600 Gossypium hirsutum
Gohir.D09G129600 Gossypium hirsutum
Gorai.006G148500 Gossypium raimondii
GSVIVG01022599001 Vitis vinifera
HanXRQChr13g0398521 Helianthus annuus
Haze_20150 Corylus avellana
Haze_20155 Corylus avellana
Haze_27322 Corylus avellana
Hma1.2p1_0079F.1_g041720 Hydrangea macrophylla
HPP92_012178 Vanilla planifolia
HPP92_012180 Vanilla planifolia
HPP92_013927 Vanilla planifolia
HPP92_013928 Vanilla planifolia
HPP92_026830 Vanilla planifolia
HPP92_026831 Vanilla planifolia
Hund10854 Selenicereus undatus
Hund14967 Selenicereus undatus
Lalb_Chr20g0111311 Lupinus albus
Lj1g0022682 Lotus japonicus
Lj7A140G6 Lonicera japonica
Lsat_1_v5_gn_6_33480 Lactuca sativa
Manes.08G034500 Manihot esculenta
Manes.09G044500 Manihot esculenta
Mapoly0052s0020 Marchantia polymorpha
MBI12_g38626_MAGBIO Magnolia biondii
MBI12_g38628_MAGBIO Magnolia biondii
MCO10G056 Micromonas commoda
MCO14G398 Micromonas commoda
MD12G1041900 Malus domestica
MD14G1041100 Malus domestica
Medtr7g106430 Medicago truncatula
MELO3C031004.2 Cucumis melo
Migut.J00690 Erythranthe guttata
MSTRG.18896 Avicennia marina
MSTRG.5889 Avicennia marina
Nitab4.5_0000121g0080 Nicotiana tabacum
Nitab4.5_0012238g0010 Nicotiana tabacum
Nn2g14347 Nelumbo nucifera
Oeu035639.1 Olea europaea
Os07g0157900 Oryza sativa ssp. japonica
Os07g0158200 Oryza sativa ssp. japonica
Os08g0165800 Oryza sativa ssp. japonica
Peaxi162Scf00012g02523 Petunia axillaris
PGR004G1515 Punica granatum
PGSC0003DMG401020557 Solanum tuberosum
Phvul.001G196500 Phaseolus vulgaris
Potri.016G068400 Populus trichocarpa
Pp3c11_16390 Physcomitrium patens
Pp3c7_11880 Physcomitrium patens
Pp3c7_11890 Physcomitrium patens
PRCOL_00003277 Prasinoderma coloniale
Prupe.7G093300 Prunus persica
Psat0s6170g0080 Pisum sativum
Psat3g205680 Pisum sativum
Psat3g205720 Pisum sativum
PSO339G6419 Papaver somniferum
PSO384G4687 Papaver somniferum
QL07p027488 Quercus lobata
RcHm_v2.0_Chr3g0476361 Rosa chinensis
Rhsim03G0063800 Rhododendron simsii
Sabra16G0069400 Salix brachista
Sc22g0002890 Simmondsia chinensis
Sed0026420 Sechium edule
SEGI_21507 Sequoiadendron giganteum
SHI18412 Sapria himalayana
SMO334G0001 Selaginella moellendorffii
Solyc06g007310.4 Solanum lycopersicum
Sopen06g002230 Solanum pennellii
Sp5g09900 Schrenkiella parvula
TAR633G0521 Trochodendron aralioides
TAR636G0548 Trochodendron aralioides
THA.LOC104803758 Tarenaya hassleriana
Thecc.05G106400 Theobroma cacao
Thhalv10010578m.g Eutrema salsugineum
TPR.G31287 Trifolium pratense
TWI74G0987 Tripterygium wilfordii
unitig_26.g9145 Utricularia gibba
vmacro07486 Vaccinium macrocarpon
VMungo1383G1979 Vigna mungo
Zm00001eb002330 Zea mays
Zm00001eb083350 Zea mays
Zm00001eb117460 Zea mays
Zm00001eb324820 Zea mays
Zm00001eb324830 Zea mays
Zm00001eb392810 Zea mays
Zm00001eb419840 Zea mays
Zm00001eb429030 Zea mays

User provided reference genes

Program Settings