Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p02630 Brassica napus
A08p02830 Brassica napus
Aa31LG10G3450 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2738 Anthoceros agrestis
Actinidia03144 Actinidia chinensis
Actinidia31846 Actinidia chinensis
Ah.05g173340 Amaranthus hybridus
AL1G58970 Arabidopsis lyrata
Aqoxy2G00239 Aquilegia oxysepala
Aqoxy3G03172 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0TLK73 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3XEJ8W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9NW0T0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GH8915 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J4ANAZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q25QIN Arachis hypogaea
AT1G51160 Arabidopsis thaliana
ATR0350G001 Amborella trichopoda
ATR0785G001 Amborella trichopoda
ATR1011G001 Amborella trichopoda
Atru.ctg97_1.50 Acer truncatum
AUR62004123 Chenopodium quinoa
AUR62013718 Chenopodium quinoa
BcaB04g17207 Brassica carinata
BcaB07g33562 Brassica carinata
BcaB07g33563 Brassica carinata
BcaC01g01270 Brassica carinata
BcaC01g01491 Brassica carinata
BcaC08g43289 Brassica carinata
BolC3t21323H Brassica oleracea
BolC6t35749H Brassica oleracea
BraA06t23471Z Brassica rapa
BraA08t32317Z Brassica rapa
C03p90030 Brassica napus
C06p06390 Brassica napus
CAN.G126.18 Capsicum annuum
CAN.G126.9 Capsicum annuum
CANSAT56G3795 Cannabis sativa
CARHR041190 Cardamine hirsuta
Carub.0001s4007 Capsella rubella
Ca_18032_v3 Cicer arietinum L.
CBR_g12583 Chara braunii
Cc02_g02200 Coffea canephora
CDE02G1119 Ceratophyllum demersum
CDE09G0886 Ceratophyllum demersum
Cfa008547 Carpinus fangiana
Ciclev10006067m.g Citrus clementina
Ciclev10023954m.g Citrus clementina
CiPaw.06G004500 Carya illinoinensis
ClCG01G000850 Citrullus lanatus
COL.COLO4_25325 Corchorus olitorius
COL.COLO4_30286 Corchorus olitorius
Cpa.g.sc3.2 Carica papaya
Cre06.g289700 Chlamydomonas reinhardtii
CsaV3_5G000990 Cucumis sativus L.
CSS0002576 Camellia sinensis var. sinensis
DCAR_020276 Daucus carota
Dinv28376 Davidia involucrata
Dinv35271 Davidia involucrata
Duzib068G1086 Durio zibethinus
Duzib205G1022 Durio zibethinus
ECA233G2204 Erigeron canadensis
Eucgr.H03364 Eucalyptus grandis
Eucgr.H03367 Eucalyptus grandis
Eucgr.H04599 Eucalyptus grandis
Eucgr.K02181 Eucalyptus grandis
FvH4_7g30501 Fragaria vesca
Glyma.01G208400 Glycine max
Glyma.11G033800 Glycine max
Gohir.A11G012900 Gossypium hirsutum
Gohir.D11G013200 Gossypium hirsutum
Gorai.003G070000 Gossypium raimondii
Gorai.007G013500 Gossypium raimondii
GSVIVG01028813001 Vitis vinifera
GSVIVG01038576001 Vitis vinifera
HanXRQChr13g0392411 Helianthus annuus
Haze_11084 Corylus avellana
Hma1.2p1_0327F.1_g126520 Hydrangea macrophylla
Hma1.2p1_1713F.1_g298920 Hydrangea macrophylla
HPP92_005259 Vanilla planifolia
Hund27400 Selenicereus undatus
Lalb_Chr03g0035011 Lupinus albus
Lalb_Chr19g0130471 Lupinus albus
Lj1A1007T60 Lonicera japonica
Lj1g0003335 Lotus japonicus
Lj3C917T6 Lonicera japonica
Lsat_1_v5_gn_8_6421 Lactuca sativa
Manes.14G020900 Manihot esculenta
Mapoly0052s0059 Marchantia polymorpha
MBI07_g11727_MAGBIO Magnolia biondii
MD01G1210500 Malus domestica
MD07G1280700 Malus domestica
Medtr4g048530 Medicago truncatula
Medtr8g095450 Medicago truncatula
MELO3C005845.2 Cucumis melo
Migut.F01073 Erythranthe guttata
Migut.F01076 Erythranthe guttata
Migut.F01078 Erythranthe guttata
MSTRG.27076 Avicennia marina
Nitab4.5_0000472g0310 Nicotiana tabacum
Nitab4.5_0006023g0030 Nicotiana tabacum
Nn1g08437 Nelumbo nucifera
Oeu040377.1 Olea europaea
Os01g0513700 Oryza sativa ssp. japonica
Peaxi162Scf00057g00141 Petunia axillaris
PGR142G1248 Punica granatum
PGSC0003DMG400020885 Solanum tuberosum
Phvul.002G057700 Phaseolus vulgaris
Potri.017G149900 Populus trichocarpa
Pp3c12_8100 Physcomitrium patens
Prupe.2G018100 Prunus persica
Prupe.2G055900 Prunus persica
Prupe.2G068700 Prunus persica
Prupe.2G302900 Prunus persica
Psat7g198120 Pisum sativum
PSO063G0462 Papaver somniferum
PSO339G0178 Papaver somniferum
PSO384G1339 Papaver somniferum
PSO782G0039 Papaver somniferum
QL09p012297 Quercus lobata
RcHm_v2.0_Chr1g0378911 Rosa chinensis
Rhsim09G0201300 Rhododendron simsii
Rhsim09G0201500 Rhododendron simsii
Sabra17G0124800 Salix brachista
SalBow2G0720 Salvia bowleyana
Sc13g0009310 Simmondsia chinensis
Sed0013201 Sechium edule
Sed0017713 Sechium edule
SEGI_19211 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05277 Striga asiatica
SGA_v2.0_scaffold52G19001 Striga asiatica
SHI13750 Sapria himalayana
SMO203G0049 Selaginella moellendorffii
Solyc03g007680.3 Solanum lycopersicum
Sopen03g003610 Solanum pennellii
THA.LOC104816907 Tarenaya hassleriana
Thecc.03G186500 Theobroma cacao
Thhalv10011827m.g Eutrema salsugineum
TPR.G4673 Trifolium pratense
TWI23G0534 Tripterygium wilfordii
unitig_0.g1157 Utricularia gibba
vmacro09813 Vaccinium macrocarpon
vmacro15551 Vaccinium macrocarpon
VMungo1215G2319 Vigna mungo
Zm00001eb052510 Zea mays
Zm00001eb217960 Zea mays

User provided reference genes

Program Settings