Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p30560 Brassica napus
Aa31LG2G9130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2701 Anthoceros agrestis
Actinidia05547 Actinidia chinensis
Actinidia26961 Actinidia chinensis
Actinidia26962 Actinidia chinensis
Ah.06g190720 Amaranthus hybridus
Ah.10g026840 Amaranthus hybridus
AL2G14430 Arabidopsis lyrata
Aqoxy4G01910 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7M140W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JX13SW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TF7ZQX Arachis hypogaea
AT1G61690 Arabidopsis thaliana
ATR0804G089 Amborella trichopoda
Atru.chr10.2050 Acer truncatum
Atru.chr10.2051 Acer truncatum
Atru.chr10.2052 Acer truncatum
Atru.chr10.2053 Acer truncatum
Atru.chr10.2054 Acer truncatum
AUR62000477 Chenopodium quinoa
AUR62006818 Chenopodium quinoa
BcaB04g20358 Brassica carinata
BcaB04g20360 Brassica carinata
BcaB04g20363 Brassica carinata
BolC1t03845H Brassica oleracea
BraA01t03188Z Brassica rapa
C01p38950 Brassica napus
CAN.G424.91 Capsicum annuum
CANSAT35G0768 Cannabis sativa
CARHR050640 Cardamine hirsuta
Carub.0002s0337 Capsella rubella
Ca_18455_v3 Cicer arietinum L.
CBR_g52260 Chara braunii
Cc02_g11860 Coffea canephora
CDE01G0539 Ceratophyllum demersum
CDE12G0347 Ceratophyllum demersum
CDE12G0914 Ceratophyllum demersum
Cfa000280 Carpinus fangiana
Ciclev10007263m.g Citrus clementina
CiPaw.09G152800 Carya illinoinensis
ClCG01G022310 Citrullus lanatus
COL.COLO4_33008 Corchorus olitorius
Cpa.g.c45157 Carica papaya
Cpa.g.sc871.1 Carica papaya
CsaV3_6G049470 Cucumis sativus L.
CSS0026607 Camellia sinensis var. sinensis
CSS0033857 Camellia sinensis var. sinensis
CSS0041207 Camellia sinensis var. sinensis
DCAR_004173 Daucus carota
Dinv17855 Davidia involucrata
Duzib160G0882 Durio zibethinus
Duzib192G0985 Durio zibethinus
ECA236G2220 Erigeron canadensis
EL10Ac4g09560 Beta vulgaris
Eucgr.H00119 Eucalyptus grandis
FAN21G2838 Fragaria x ananassa
FAN25G0472 Fragaria x ananassa
FAN25G1045 Fragaria x ananassa
FAN25G1652 Fragaria x ananassa
FvH4_3g03041 Fragaria vesca
FvH4_3g03071 Fragaria vesca
Glyma.07G187500 Glycine max
Glyma.08G061700 Glycine max
Gohir.A06G208600 Gossypium hirsutum
Gohir.A10G017400 Gossypium hirsutum
Gohir.D06G212500 Gossypium hirsutum
Gohir.D10G017600 Gossypium hirsutum
Gorai.010G253600 Gossypium raimondii
Gorai.011G019500 Gossypium raimondii
GSVIVG01002717001 Vitis vinifera
GSVIVG01006404001 Vitis vinifera
GSVIVG01006464001 Vitis vinifera
HanXRQChr05g0130831 Helianthus annuus
Haze_06662 Corylus avellana
Hma1.2p1_0809F.1_g221780 Hydrangea macrophylla
HPP92_016843 Vanilla planifolia
Hund23540 Selenicereus undatus
Lalb_Chr09g0327171 Lupinus albus
Lj2C276T6 Lonicera japonica
Lj4g0001880 Lotus japonicus
Lsat_1_v5_gn_7_18540 Lactuca sativa
Manes.15G164500 Manihot esculenta
Mapoly0032s0118 Marchantia polymorpha
MBI07_g11719_MAGBIO Magnolia biondii
MD05G1335200 Malus domestica
MD10G1310700 Malus domestica
Medtr4g092040 Medicago truncatula
MELO3C007343.2 Cucumis melo
MELO3C007345.2 Cucumis melo
MELO3C007347.2 Cucumis melo
Migut.N00381 Erythranthe guttata
MSTRG.4220 Avicennia marina
Nitab4.5_0000503g0050 Nicotiana tabacum
Nitab4.5_0000503g0120 Nicotiana tabacum
Nitab4.5_0006456g0050 Nicotiana tabacum
Nn1g03751 Nelumbo nucifera
Oeu015946.3 Olea europaea
Oeu022112.1 Olea europaea
Oeu030881.1 Olea europaea
Oeu045309.1 Olea europaea
Os03g0669800 Oryza sativa ssp. japonica
Peaxi162Scf00931g00055 Petunia axillaris
PGR031G2928 Punica granatum
PGSC0003DMG400021720 Solanum tuberosum
Phvul.002G219000 Phaseolus vulgaris
Potri.004G030500 Populus trichocarpa
Potri.011G032200 Populus trichocarpa
Pp3c16_8350 Physcomitrium patens
Prupe.4G011500 Prunus persica
Prupe.4G012200 Prunus persica
Prupe.4G030200 Prunus persica
Psat2g029640 Pisum sativum
Psat7g105840 Pisum sativum
PSO210G4646 Papaver somniferum
PSO832G1831 Papaver somniferum
QL05p077365 Quercus lobata
RcHm_v2.0_Chr5g0004701 Rosa chinensis
Rhsim13G0163000 Rhododendron simsii
Sabra11G0019400 Salix brachista
Sabra11G0025300 Salix brachista
SalBow4G2671 Salvia bowleyana
Sc05g0008390 Simmondsia chinensis
Sed0023382 Sechium edule
SEGI_24274 Sequoiadendron giganteum
SGA_v2.0_scaffold216G42402 Striga asiatica
SHI02133 Sapria himalayana
SMO141G0003 Selaginella moellendorffii
Sopen02g024620 Solanum pennellii
Sp2g02860 Schrenkiella parvula
Sp2g02870 Schrenkiella parvula
TAR624G1039 Trochodendron aralioides
TAR626G0260 Trochodendron aralioides
TAR626G0500 Trochodendron aralioides
TAR626G1585 Trochodendron aralioides
THA.LOC104809525 Tarenaya hassleriana
Thecc.06G207200 Theobroma cacao
Thhalv10023224m.g Eutrema salsugineum
TPR.G13921 Trifolium pratense
TWI63G0986 Tripterygium wilfordii
unitig_736.g22481 Utricularia gibba
vmacro03741 Vaccinium macrocarpon
VMungo0251G0970 Vigna mungo
Zm00001eb245580 Zea mays
Zm00001eb277090 Zea mays
Zm00001eb411780 Zea mays

User provided reference genes

Program Settings