Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p19570 Brassica napus
Aa31LG9G12440 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2863 Anthoceros agrestis
Actinidia28601 Actinidia chinensis
Actinidia37922 Actinidia chinensis
Ah.00g000800 Amaranthus hybridus
AL8G19280 Arabidopsis lyrata
Aqoxy6G01728 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1X7ZBM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VXG7Z6 Arachis hypogaea
AT5G42320 Arabidopsis thaliana
ATR0661G305 Amborella trichopoda
Atru.chr13.135 Acer truncatum
AUR62036871 Chenopodium quinoa
BcaB07g31085 Brassica carinata
BcaC04g22006 Brassica carinata
BcaNung05254 Brassica carinata
BcaNung05255 Brassica carinata
BolC4t24047H Brassica oleracea
BolC9t55384H Brassica oleracea
BraA09t37570Z Brassica rapa
C04p25390 Brassica napus
C09p24930 Brassica napus
CAN.G311.115 Capsicum annuum
CANSAT25G1708 Cannabis sativa
CARHR284930 Cardamine hirsuta
Carub.0008s0686 Capsella rubella
Ca_15433_v3 Cicer arietinum L.
Ca_15458_v3 Cicer arietinum L.
Cc00_g07920 Coffea canephora
Cc10_g00670 Coffea canephora
Cc10_g14360 Coffea canephora
CDE05G1644 Ceratophyllum demersum
Cfa014076 Carpinus fangiana
Ciclev10003241m.g Citrus clementina
CiPaw.07G138900 Carya illinoinensis
CiPaw.08G073000 Carya illinoinensis
ClCG08G009440 Citrullus lanatus
COL.COLO4_06662 Corchorus olitorius
Cpa.g.sc26.198 Carica papaya
Cre06.g253150 Chlamydomonas reinhardtii
Cre11.g467631 Chlamydomonas reinhardtii
Cre16.g668950 Chlamydomonas reinhardtii
CsaV3_6G031580 Cucumis sativus L.
CSS0019336 Camellia sinensis var. sinensis
CSS0020606 Camellia sinensis var. sinensis
CSS0022218 Camellia sinensis var. sinensis
DCAR_016769 Daucus carota
Dinv05534 Davidia involucrata
Dinv31939 Davidia involucrata
Duzib041G0467 Durio zibethinus
Duzib093G0577 Durio zibethinus
Duzib116G0840 Durio zibethinus
ECA238G0848 Erigeron canadensis
ECA238G3411 Erigeron canadensis
EL10Ac1g01960 Beta vulgaris
EL10Ac7g16836 Beta vulgaris
Eucgr.E03516 Eucalyptus grandis
Eucgr.L00923 Eucalyptus grandis
FAN15G0126 Fragaria x ananassa
FAN20G1306 Fragaria x ananassa
FAN27G2626 Fragaria x ananassa
FvH4_2g37450 Fragaria vesca
Glyma.04G017900 Glycine max
Glyma.06G018200 Glycine max
Gohir.A01G105600 Gossypium hirsutum
Gohir.A05G179600 Gossypium hirsutum
Gohir.D01G091900 Gossypium hirsutum
Gohir.D05G182800 Gossypium hirsutum
Gorai.002G117000 Gossypium raimondii
Gorai.009G188100 Gossypium raimondii
GSVIVG01013360001 Vitis vinifera
HanXRQChr06g0183991 Helianthus annuus
Haze_22773 Corylus avellana
Hma1.2p1_0507F.1_g168460 Hydrangea macrophylla
HPP92_007117 Vanilla planifolia
Hund05112 Selenicereus undatus
Lalb_Chr11g0061631 Lupinus albus
Lalb_Chr23g0265791 Lupinus albus
Lj1g0005535 Lotus japonicus
Lj4A11T69 Lonicera japonica
Lsat_1_v5_gn_1_87521 Lactuca sativa
Lsat_1_v5_gn_2_5181 Lactuca sativa
Lsat_1_v5_gn_8_26201 Lactuca sativa
Manes.05G134400 Manihot esculenta
Manes.18G005400 Manihot esculenta
Mapoly0045s0063 Marchantia polymorpha
MBI08_g41521_MAGBIO Magnolia biondii
MCO16G405 Micromonas commoda
MD00G1076900 Malus domestica
MD08G1002400 Malus domestica
MD12G1003300 Malus domestica
MD15G1002000 Malus domestica
Medtr3g115290 Medicago truncatula
MELO3C026539.2 Cucumis melo
Migut.C00961 Erythranthe guttata
Nitab4.5_0000588g0110 Nicotiana tabacum
Nn5g30942 Nelumbo nucifera
Oeu035185.1 Olea europaea
Oeu056206.2 Olea europaea
Os02g0119300 Oryza sativa ssp. japonica
Peaxi162Scf00893g00037 Petunia axillaris
PGR083G1107 Punica granatum
PGSC0003DMG400009979 Solanum tuberosum
Phvul.009G010800 Phaseolus vulgaris
Potri.002G010800 Populus trichocarpa
Potri.005G250300 Populus trichocarpa
Pp3c20_16570 Physcomitrium patens
PRCOL_00005708 Prasinoderma coloniale
PRCOL_00006814 Prasinoderma coloniale
Prupe.1G354500 Prunus persica
Psat5g159120 Pisum sativum
PSO541G3228 Papaver somniferum
PSO675G8084 Papaver somniferum
QL02p014036 Quercus lobata
RcHm_v2.0_Chr6g0304271 Rosa chinensis
Rhsim06G0007400 Rhododendron simsii
Rhsim07G0254900 Rhododendron simsii
Sabra05G0193900 Salix brachista
SalBow7G1095 Salvia bowleyana
Sc15g0004430 Simmondsia chinensis
Sc15g0004440 Simmondsia chinensis
Sed0024407 Sechium edule
SEGI_03459 Sequoiadendron giganteum
SEGI_37631 Sequoiadendron giganteum
SGA_v2.0_scaffold108G30863 Striga asiatica
SGA_v2.0_scaffold195G40773 Striga asiatica
SGA_v2.0_scaffold83G26467 Striga asiatica
SHI07997 Sapria himalayana
SMO358G0159 Selaginella moellendorffii
Solyc04g082340.3 Solanum lycopersicum
Solyc05g025870.4 Solanum lycopersicum
Sopen04g035960 Solanum pennellii
Sp7g08250 Schrenkiella parvula
TAR625G0173 Trochodendron aralioides
THA.LOC104813172 Tarenaya hassleriana
Thecc.08G058900 Theobroma cacao
Thhalv10027780m.g Eutrema salsugineum
TPR.G33884 Trifolium pratense
TPR.G38202 Trifolium pratense
TWI56G0714 Tripterygium wilfordii
unitig_747.g21516 Utricularia gibba
vmacro04403 Vaccinium macrocarpon
vmacro21811 Vaccinium macrocarpon
VMungo1309G1587 Vigna mungo
Zm00001eb209310 Zea mays

User provided reference genes

Program Settings