Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p48250 Brassica napus
Aa31LG10G10370 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2572 Anthoceros agrestis
Actinidia02951 Actinidia chinensis
Actinidia07729 Actinidia chinensis
Ah.10g037270 Amaranthus hybridus
AL5G36500 Arabidopsis lyrata
Aqoxy4G02912 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4ZRU7U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5S3M3D Arachis hypogaea
AT3G55360 Arabidopsis thaliana
ATR0559G034 Amborella trichopoda
Atru.chr12.456 Acer truncatum
Atru.chr12.478 Acer truncatum
Atru.chr8.1964 Acer truncatum
AUR62014578 Chenopodium quinoa
AUR62039383 Chenopodium quinoa
BcaB01g00109 Brassica carinata
BcaC07g39849 Brassica carinata
BolC6t37460H Brassica oleracea
BolC8t50671H Brassica oleracea
BraA07t29257Z Brassica rapa
BraA09t40278Z Brassica rapa
C08p30520 Brassica napus
CAN.G1013.24 Capsicum annuum
CANSAT35G1058 Cannabis sativa
CARHR165370 Cardamine hirsuta
Carub.0005s2200 Capsella rubella
Ca_06145_v3 Cicer arietinum L.
CBR_g107 Chara braunii
Cc00_g31070 Coffea canephora
Cc02_g07900 Coffea canephora
CDE02G1562 Ceratophyllum demersum
CDE09G1206 Ceratophyllum demersum
Cfa001478 Carpinus fangiana
Ciclev10032183m.g Citrus clementina
CiPaw.01G287000 Carya illinoinensis
CiPaw.02G183600 Carya illinoinensis
ClCG04G008230 Citrullus lanatus
ClCG09G019780 Citrullus lanatus
COL.COLO4_15035 Corchorus olitorius
Cpa.g.c31433 Carica papaya
Cre14.g615050 Chlamydomonas reinhardtii
CsaV3_4G024940 Cucumis sativus L.
CsaV3_5G026640 Cucumis sativus L.
CSS0018512 Camellia sinensis var. sinensis
DCAR_011693 Daucus carota
Dinv03051 Davidia involucrata
Dinv35613 Davidia involucrata
Duzib106G0291 Durio zibethinus
Duzib114G0065 Durio zibethinus
ECA238G0837 Erigeron canadensis
EL10Ac2g04754 Beta vulgaris
Eucgr.G02931 Eucalyptus grandis
FAN10G1013 Fragaria x ananassa
FvH4_7g22400 Fragaria vesca
Glyma.02G273300 Glycine max
Glyma.14G043500 Glycine max
Gohir.A05G349500 Gossypium hirsutum
Gohir.A10G218500 Gossypium hirsutum
Gohir.D04G062800 Gossypium hirsutum
Gohir.D10G228100 Gossypium hirsutum
Gorai.011G260500 Gossypium raimondii
Gorai.012G070200 Gossypium raimondii
GSVIVG01016549001 Vitis vinifera
HanXRQChr02g0037461 Helianthus annuus
HanXRQChr08g0220691 Helianthus annuus
HanXRQChr14g0457911 Helianthus annuus
Haze_17065 Corylus avellana
Haze_26509 Corylus avellana
Hma1.2p1_0493F.1_g164810 Hydrangea macrophylla
HPP92_006613 Vanilla planifolia
Hund13757 Selenicereus undatus
Hund16091 Selenicereus undatus
Lalb_Chr10g0105851 Lupinus albus
Lalb_Chr17g0347451 Lupinus albus
Lj1A937T93 Lonicera japonica
Lj8A85T48 Lonicera japonica
LjContig00564g0003972 Lotus japonicus
Lsat_1_v5_gn_2_119361 Lactuca sativa
Manes.07G115800 Manihot esculenta
Manes.10G030900 Manihot esculenta
Mapoly0001s0158 Marchantia polymorpha
MBI05_g30240_MAGBIO Magnolia biondii
MCO15G355 Micromonas commoda
MD01G1133600 Malus domestica
MD07G1197900 Malus domestica
Medtr5g087590 Medicago truncatula
MELO3C021634.2 Cucumis melo
Migut.F01507 Erythranthe guttata
MSTRG.8244 Avicennia marina
Nitab4.5_0001992g0020 Nicotiana tabacum
Nitab4.5_0006489g0030 Nicotiana tabacum
Nn2g10381 Nelumbo nucifera
Oeu048254.1 Olea europaea
Oeu064390.1 Olea europaea
Os01g0150000 Oryza sativa ssp. japonica
Peaxi162Scf00015g01122 Petunia axillaris
PGR044G0197 Punica granatum
PGR142G4329 Punica granatum
PGSC0003DMG400023428 Solanum tuberosum
Phvul.008G208700 Phaseolus vulgaris
Potri.008G055400 Populus trichocarpa
Potri.010G204400 Populus trichocarpa
Pp3c16_5330 Physcomitrium patens
Pp3c16_5340 Physcomitrium patens
Pp3c27_2450 Physcomitrium patens
PRCOL_00004526 Prasinoderma coloniale
Prupe.2G234700 Prunus persica
Psat0s921g0200 Pisum sativum
PSO151G0123 Papaver somniferum
PSO339G1516 Papaver somniferum
PSO339G2840 Papaver somniferum
PSO384G3927 Papaver somniferum
QL07p048136 Quercus lobata
QL08p059856 Quercus lobata
RcHm_v2.0_Chr1g0367031 Rosa chinensis
Rhsim09G0165600 Rhododendron simsii
Sabra08G0040000 Salix brachista
Sabra10G0158000 Salix brachista
Sc10g0001530 Simmondsia chinensis
Sc11g0007960 Simmondsia chinensis
Sed0008291 Sechium edule
Sed0011488 Sechium edule
SEGI_04878 Sequoiadendron giganteum
SGA_v2.0_scaffold62G21508 Striga asiatica
SMO111G0037 Selaginella moellendorffii
Solyc05g054490.3 Solanum lycopersicum
Sopen05g032970 Solanum pennellii
Sp5g07110 Schrenkiella parvula
TAR623G1530 Trochodendron aralioides
TAR636G2208 Trochodendron aralioides
THA.LOC104806959 Tarenaya hassleriana
THA.LOC104810019 Tarenaya hassleriana
Thecc.10G042800 Theobroma cacao
Thhalv10010564m.g Eutrema salsugineum
TPR.G11707 Trifolium pratense
TPR.G11759 Trifolium pratense
TWI38G0280 Tripterygium wilfordii
TWI63G0876 Tripterygium wilfordii
unitig_736.g22316 Utricularia gibba
unitig_899.g15066 Utricularia gibba
vmacro07168 Vaccinium macrocarpon
vmacro10239 Vaccinium macrocarpon
VMungo0647G2337 Vigna mungo
Zm00001eb335900 Zea mays

User provided reference genes

Program Settings