Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p33760 Brassica napus
Aa31LG5G15060 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1429 Anthoceros agrestis
Actinidia18366 Actinidia chinensis
Ah.04g162190 Amaranthus hybridus
AL248U10010 Arabidopsis lyrata
AL3G14690 Arabidopsis lyrata
Aqoxy5G00319 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.01P7ER Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9VED02 Arachis hypogaea
AT3G04650 Arabidopsis thaliana
ATR0665G099 Amborella trichopoda
Atru.BG.126.p Acer truncatum
Atru.chr2.845 Acer truncatum
Atru.chr2.852 Acer truncatum
AUR62001056 Chenopodium quinoa
AUR62004896 Chenopodium quinoa
AUR62044106 Chenopodium quinoa
BcaB04g19310 Brassica carinata
BcaC01g04358 Brassica carinata
BolC3t16228H Brassica oleracea
BolC3t16395H Brassica oleracea
BraA03t12549Z Brassica rapa
C03p41060 Brassica napus
C05p55240 Brassica napus
CAN.G134.75 Capsicum annuum
CANSAT54G2420 Cannabis sativa
CARHR078850 Cardamine hirsuta
Carub.0003s0381 Capsella rubella
Ca_09430_v3 Cicer arietinum L.
CBR_g26324 Chara braunii
Cc02_g30900 Coffea canephora
Cc02_g30910 Coffea canephora
Cfa006396 Carpinus fangiana
Ciclev10029649m.g Citrus clementina
Ciclev10029659m.g Citrus clementina
Ciclev10029734m.g Citrus clementina
Ciclev10029743m.g Citrus clementina
Ciclev10029835m.g Citrus clementina
Ciclev10029972m.g Citrus clementina
Ciclev10030009m.g Citrus clementina
Ciclev10030138m.g Citrus clementina
Ciclev10030251m.g Citrus clementina
CiPaw.08G122000 Carya illinoinensis
CiPaw.08G122100 Carya illinoinensis
ClCG02G016790 Citrullus lanatus
COL.COLO4_15380 Corchorus olitorius
Cpa.g.sc736.2 Carica papaya
Cre03.g207150 Chlamydomonas reinhardtii
Cre05.g245150 Chlamydomonas reinhardtii
CsaV3_2G003960 Cucumis sativus L.
CSS0014237 Camellia sinensis var. sinensis
CSS0032730 Camellia sinensis var. sinensis
DCAR_006646 Daucus carota
Dinv17936 Davidia involucrata
Duzib177G0775 Durio zibethinus
ECA232G3987 Erigeron canadensis
EL10Ac4g09082 Beta vulgaris
Eucgr.H04317 Eucalyptus grandis
FAN07G0296 Fragaria x ananassa
FAN12G0393 Fragaria x ananassa
FAN12G0908 Fragaria x ananassa
FvH4_4g17540 Fragaria vesca
Glyma.03G247900 Glycine max
Glyma.19G245900 Glycine max
Gohir.A07G068900 Gossypium hirsutum
Gohir.A08G216000 Gossypium hirsutum
Gohir.A13G075900 Gossypium hirsutum
Gohir.D01G029000 Gossypium hirsutum
Gohir.D02G179700 Gossypium hirsutum
Gohir.D08G124750 Gossypium hirsutum
Gohir.D08G232600 Gossypium hirsutum
Gohir.D08G233000 Gossypium hirsutum
Gohir.D11G185600 Gossypium hirsutum
Gorai.004G247100 Gossypium raimondii
Gorai.004G247500 Gossypium raimondii
GSVIVG01029790001 Vitis vinifera
GSVIVG01036232001 Vitis vinifera
HanXRQChr09g0259781 Helianthus annuus
Haze_04379 Corylus avellana
Hma1.2p1_0817F.1_g223190 Hydrangea macrophylla
HPP92_014225 Vanilla planifolia
HPP92_026486 Vanilla planifolia
Hund06950 Selenicereus undatus
Lalb_Chr18g0043951 Lupinus albus
Lj1g0023983 Lotus japonicus
Lj9C664G10 Lonicera japonica
Lsat_1_v5_gn_0_36021 Lactuca sativa
Manes.08G136400 Manihot esculenta
Mapoly0079s0067 Marchantia polymorpha
MBI11_g20622_MAGBIO Magnolia biondii
MBI11_g34846_MAGBIO Magnolia biondii
MCO11G331 Micromonas commoda
MCO15G267 Micromonas commoda
MD04G1226700 Malus domestica
Medtr1g106590 Medicago truncatula
Medtr7g115310 Medicago truncatula
MELO3C004395.2 Cucumis melo
Migut.N01919 Erythranthe guttata
MSTRG.5089 Avicennia marina
Nitab4.5_0002247g0050 Nicotiana tabacum
Nitab4.5_0002247g0060 Nicotiana tabacum
Nitab4.5_0003027g0090 Nicotiana tabacum
Nitab4.5_0010168g0020 Nicotiana tabacum
Nn1g02615 Nelumbo nucifera
Oeu038460.1 Olea europaea
Os12g0597400 Oryza sativa ssp. japonica
Peaxi162Scf00282g00718 Petunia axillaris
PGR004G1863 Punica granatum
PGSC0003DMG400027514 Solanum tuberosum
Phvul.006G102800 Phaseolus vulgaris
Potri.005G055800 Populus trichocarpa
Pp3c10_12680 Physcomitrium patens
Pp3c3_15330 Physcomitrium patens
PRCOL_00004966 Prasinoderma coloniale
Prupe.6G345400 Prunus persica
Psat0s169g0040 Pisum sativum
PSO063G6470 Papaver somniferum
PSO170G0405 Papaver somniferum
QL03p027727 Quercus lobata
RcHm_v2.0_Chr4g0421451 Rosa chinensis
Rhsim07G0074600 Rhododendron simsii
Sabra05G0048700 Salix brachista
SalBow4G0099 Salvia bowleyana
SalBow4G1942 Salvia bowleyana
Sc06g0003780 Simmondsia chinensis
Sed0022916 Sechium edule
SEGI_19809 Sequoiadendron giganteum
SEGI_22607 Sequoiadendron giganteum
SEGI_30682 Sequoiadendron giganteum
SGA_v2.0_scaffold80G25897 Striga asiatica
SMO367G1262 Selaginella moellendorffii
Solyc01g097160.3 Solanum lycopersicum
Sopen01g040830 Solanum pennellii
Sp3g03490 Schrenkiella parvula
TAR365G0219 Trochodendron aralioides
THA.LOC104802845 Tarenaya hassleriana
Thecc.05G280500 Theobroma cacao
Thhalv10020605m.g Eutrema salsugineum
TPR.G6919 Trifolium pratense
TWI12G0989 Tripterygium wilfordii
unitig_0.g2303 Utricularia gibba
vmacro13816 Vaccinium macrocarpon
VMungo0540G0367 Vigna mungo
VMungo0600G0001 Vigna mungo
Zm00001eb030960 Zea mays

User provided reference genes

Program Settings