Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p22480 Brassica napus
Aa31LG4G13020 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.603 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1932 Anthoceros agrestis
Actinidia30254 Actinidia chinensis
Actinidia39620 Actinidia chinensis
Ah.14g084680 Amaranthus hybridus
AL5G12790 Arabidopsis lyrata
Aqoxy7G00978 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C788P2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EYQ1XG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T9PSLR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UG5RRW Arachis hypogaea
AT2G03140 Arabidopsis thaliana
ATR0681G090 Amborella trichopoda
Atru.chr7.1762 Acer truncatum
Atru.chr7.1763 Acer truncatum
AUR62025308 Chenopodium quinoa
AUR62028313 Chenopodium quinoa
BcaC04g18854 Brassica carinata
BolC9t58866H Brassica oleracea
BraA10t44307Z Brassica rapa
C09p60330 Brassica napus
CAN.G140.31 Capsicum annuum
CAN.G210.4 Capsicum annuum
CANSAT56G0085 Cannabis sativa
CANSAT56G2058 Cannabis sativa
CARHR152560 Cardamine hirsuta
CARHR152570 Cardamine hirsuta
CARHR289930 Cardamine hirsuta
Carub.0005s0197 Capsella rubella
Ca_21337_v3 Cicer arietinum L.
Ca_30968_v3 Cicer arietinum L.
Cc06_g12660 Coffea canephora
CDE04G2636 Ceratophyllum demersum
Cfa002940 Carpinus fangiana
Ciclev10007237m.g Citrus clementina
CiPaw.03G200700 Carya illinoinensis
ClCG11G000010 Citrullus lanatus
COL.COLO4_21211 Corchorus olitorius
Cpa.g.sc577.1 Carica papaya
Cpa.g.sc82.66 Carica papaya
CsaV3_5G027680 Cucumis sativus L.
CSS0025527 Camellia sinensis var. sinensis
DCAR_028528 Daucus carota
Dinv25511 Davidia involucrata
Dinv42429 Davidia involucrata
Duzib168G0854 Durio zibethinus
ECA234G0156 Erigeron canadensis
EL10Ac8g18978 Beta vulgaris
Eucgr.C00770 Eucalyptus grandis
Eucgr.I00075 Eucalyptus grandis
FAN19G2002 Fragaria x ananassa
FAN23G0697 Fragaria x ananassa
FAN28G0954 Fragaria x ananassa
FvH4_1g09310 Fragaria vesca
Glyma.13G113900 Glycine max
Glyma.17G045900 Glycine max
Gohir.A05G035900 Gossypium hirsutum
Gohir.D05G037400 Gossypium hirsutum
Gorai.009G037900 Gossypium raimondii
GSVIVG01015020001 Vitis vinifera
HanXRQChr10g0319771 Helianthus annuus
Haze_26065 Corylus avellana
HPP92_016226 Vanilla planifolia
HPP92_016227 Vanilla planifolia
HPP92_016239 Vanilla planifolia
Hund26106 Selenicereus undatus
Lalb_Chr13g0299211 Lupinus albus
Lj4A920G55 Lonicera japonica
Lj4g0009327 Lotus japonicus
Lsat_1_v5_gn_5_139061 Lactuca sativa
Manes.16G092800 Manihot esculenta
Mapoly0027s0173 Marchantia polymorpha
MBI19_g37996_MAGBIO Magnolia biondii
MD02G1100300 Malus domestica
MD15G1223200 Malus domestica
MD15G1223300 Malus domestica
Medtr4g124670 Medicago truncatula
Medtr8g078690 Medicago truncatula
MELO3C022901.2 Cucumis melo
Migut.J00884 Erythranthe guttata
MSTRG.19429 Avicennia marina
Nitab4.5_0000170g0030 Nicotiana tabacum
Nitab4.5_0007169g0020 Nicotiana tabacum
Nn1g03195 Nelumbo nucifera
Nn2g15040 Nelumbo nucifera
Nn6g32039 Nelumbo nucifera
Nn8g38537 Nelumbo nucifera
Oeu028111.1 Olea europaea
Oeu028112.1 Olea europaea
Oeu045002.1 Olea europaea
Os09g0436800 Oryza sativa ssp. japonica
Peaxi162Scf00191g00046 Petunia axillaris
PGR142G3115 Punica granatum
PGSC0003DMG400013574 Solanum tuberosum
Phvul.003G127600 Phaseolus vulgaris
Potri.006G136900 Populus trichocarpa
Pp3c18_16020 Physcomitrium patens
Pp3c22_7040 Physcomitrium patens
PRCOL_00005095 Prasinoderma coloniale
Prupe.7G192500 Prunus persica
Psat4g019280 Pisum sativum
PSO104G0049 Papaver somniferum
PSO421G0465 Papaver somniferum
QL02p053078 Quercus lobata
QL04p062404 Quercus lobata
QL05p032556 Quercus lobata
QL05p042765 Quercus lobata
QL09p010018 Quercus lobata
QL09p020075 Quercus lobata
QL10p007329 Quercus lobata
QL10p017739 Quercus lobata
QL10p017873 Quercus lobata
QL10p017877 Quercus lobata
QL11p002844 Quercus lobata
QL11p013523 Quercus lobata
RcHm_v2.0_Chr2g0095891 Rosa chinensis
Rhsim03G0225900 Rhododendron simsii
Rhsim05G0002500 Rhododendron simsii
Sabra06G0107000 Salix brachista
SalBow6G0425 Salvia bowleyana
Sc08g0009130 Simmondsia chinensis
Sed0023749 Sechium edule
SEGI_07817 Sequoiadendron giganteum
SEGI_12022 Sequoiadendron giganteum
SEGI_27630 Sequoiadendron giganteum
SGA_v2.0_scaffold127G34012 Striga asiatica
SGA_v2.0_scaffold31G12693 Striga asiatica
SMO228G0085 Selaginella moellendorffii
Solyc07g042500.4 Solanum lycopersicum
Sopen07g022170 Solanum pennellii
Sp6g27400 Schrenkiella parvula
TAR624G0588 Trochodendron aralioides
TAR624G0814 Trochodendron aralioides
TAR624G1119 Trochodendron aralioides
TAR624G1201 Trochodendron aralioides
THA.LOC104811288 Tarenaya hassleriana
Thecc.09G070600 Theobroma cacao
Thhalv10012418m.g Eutrema salsugineum
TPR.G12583 Trifolium pratense
TWI34G1091 Tripterygium wilfordii
unitig_27.g24782 Utricularia gibba
vmacro06355 Vaccinium macrocarpon
VMungo1215G1386 Vigna mungo
Zm00001eb313890 Zea mays

User provided reference genes

Program Settings