Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p30380 Brassica napus
Aa31LG2G9240 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3296 Anthoceros agrestis
Actinidia11821 Actinidia chinensis
Actinidia24048 Actinidia chinensis
Ah.09g236300 Amaranthus hybridus
Ah.09g236480 Amaranthus hybridus
Ah.14g088780 Amaranthus hybridus
AL2G14620 Arabidopsis lyrata
Aqoxy7G03433 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ANU5MI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FY8LHX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XU4W4S Arachis hypogaea
AT1G61620 Arabidopsis thaliana
ATR1132G008 Amborella trichopoda
ATR1132G047 Amborella trichopoda
Atru.chr10.2036 Acer truncatum
Atru.chr10.2037 Acer truncatum
AUR62012514 Chenopodium quinoa
AUR62014685 Chenopodium quinoa
BcaB04g20348 Brassica carinata
BcaB04g20349 Brassica carinata
BcaC06g31855 Brassica carinata
BolC1t03821H Brassica oleracea
BraA01t03171Z Brassica rapa
C01p38590 Brassica napus
CAN.G424.38 Capsicum annuum
CANSAT56G0975 Cannabis sativa
CARHR011610 Cardamine hirsuta
CARHR050750 Cardamine hirsuta
CARHR260990 Cardamine hirsuta
Carub.0002s0357 Capsella rubella
Ca_00225_v3 Cicer arietinum L.
CBR_g4035 Chara braunii
Cc06_g18220 Coffea canephora
CDE02G1411 Ceratophyllum demersum
CDE05G3522 Ceratophyllum demersum
Cfa000313 Carpinus fangiana
Cfa022197 Carpinus fangiana
Ciclev10016069m.g Citrus clementina
CiPaw.10G115700 Carya illinoinensis
ClCG06G001360 Citrullus lanatus
ClCG09G021600 Citrullus lanatus
COL.COLO4_31636 Corchorus olitorius
Cpa.g.sc27.158 Carica papaya
Cre02.g142086 Chlamydomonas reinhardtii
CsaV3_6G007300 Cucumis sativus L.
CsaV3_7G021490 Cucumis sativus L.
CSS0003935 Camellia sinensis var. sinensis
CSS0043949 Camellia sinensis var. sinensis
DCAR_004161 Daucus carota
DCAR_008096 Daucus carota
Dinv18977 Davidia involucrata
Duzib160G0488 Durio zibethinus
Duzib235G0052 Durio zibethinus
ECA234G4718 Erigeron canadensis
EL10Ac6g14131 Beta vulgaris
Eucgr.D00772 Eucalyptus grandis
FAN11G1262 Fragaria x ananassa
FAN16G2329 Fragaria x ananassa
FAN21G3866 Fragaria x ananassa
FAN25G2418 Fragaria x ananassa
FvH4_3g03660 Fragaria vesca
Glyma.13G247800 Glycine max
Glyma.15G066000 Glycine max
Gohir.A10G019000 Gossypium hirsutum
Gohir.D10G019900 Gossypium hirsutum
Gorai.011G021100 Gossypium raimondii
GSVIVG01003678001 Vitis vinifera
HanXRQChr10g0310231 Helianthus annuus
HanXRQChr12g0359441 Helianthus annuus
Haze_06613 Corylus avellana
Hma1.2p1_0155F.1_g068340 Hydrangea macrophylla
HPP92_010075 Vanilla planifolia
Hund21294 Selenicereus undatus
Lalb_Chr18g0060031 Lupinus albus
Lj1A1216T23 Lonicera japonica
Lj6g0004146 Lotus japonicus
Lsat_1_v5_gn_5_78441 Lactuca sativa
Manes.16G019177 Manihot esculenta
Manes.17G032800 Manihot esculenta
Mapoly0029s0083 Marchantia polymorpha
MCO09G390 Micromonas commoda
MD05G1329000 Malus domestica
MD10G1305900 Malus domestica
Medtr2g011480 Medicago truncatula
MELO3C013201.2 Cucumis melo
MELO3C022396.2 Cucumis melo
Migut.H01530 Erythranthe guttata
Migut.M01229 Erythranthe guttata
MSTRG.7276 Avicennia marina
Nitab4.5_0000649g0190 Nicotiana tabacum
Nitab4.5_0005620g0020 Nicotiana tabacum
Nn1g06832 Nelumbo nucifera
Oeu027963.1 Olea europaea
Oeu030047.2 Olea europaea
Os03g0279900 Oryza sativa ssp. japonica
Peaxi162Scf00047g00079 Petunia axillaris
Peaxi162Scf01035g00217 Petunia axillaris
Peaxi162Scf01152g00110 Petunia axillaris
PGR031G1397 Punica granatum
PGSC0003DMG400022347 Solanum tuberosum
Phvul.006G193700 Phaseolus vulgaris
Potri.004G026800 Populus trichocarpa
Potri.011G040000 Populus trichocarpa
Pp3c15_12040 Physcomitrium patens
Pp3c9_6940 Physcomitrium patens
PRCOL_00001084 Prasinoderma coloniale
Prupe.4G033800 Prunus persica
Psat1g209560 Pisum sativum
PSO210G2069 Papaver somniferum
QL05p080508 Quercus lobata
RcHm_v2.0_Chr5g0005701 Rosa chinensis
Rhsim02G0118100 Rhododendron simsii
Sabra04G0015300 Salix brachista
Sabra11G0027500 Salix brachista
Sc24g0000680 Simmondsia chinensis
Sed0008986 Sechium edule
Sed0024430 Sechium edule
SGA_v2.0_scaffold114G31993 Striga asiatica
SGA_v2.0_scaffold7G03907 Striga asiatica
SHI00053 Sapria himalayana
SMO147G0402 Selaginella moellendorffii
Solyc02g079400.3 Solanum lycopersicum
Sopen02g024200 Solanum pennellii
Sp2g02960 Schrenkiella parvula
TAR626G1242 Trochodendron aralioides
TAR627G0857 Trochodendron aralioides
THA.LOC104809541 Tarenaya hassleriana
Thecc.06G202500 Theobroma cacao
Thhalv10023604m.g Eutrema salsugineum
TPR.G19604 Trifolium pratense
TWI38G0490 Tripterygium wilfordii
TWI63G0506 Tripterygium wilfordii
unitig_26.g9381 Utricularia gibba
unitig_749.g13632 Utricularia gibba
vmacro15853 Vaccinium macrocarpon
vmacro15854 Vaccinium macrocarpon
VMungo0540G0293 Vigna mungo
Zm00001eb012710 Zea mays
Zm00001eb396290 Zea mays
Zm00001eb397440 Zea mays
Zm00001eb397450 Zea mays
Zm00001eb397460 Zea mays
Zm00001eb397470 Zea mays
Zm00001eb397480 Zea mays

User provided reference genes

Program Settings