Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p19000 Brassica napus
Aa31LG1G13700 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.775 Anthoceros agrestis
Actinidia07012 Actinidia chinensis
Actinidia37188 Actinidia chinensis
Ah.08g222830 Amaranthus hybridus
AL6G32630 Arabidopsis lyrata
Aqoxy2G00066 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4E592X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JSP71L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PKBV9I Arachis hypogaea
AT5G21070 Arabidopsis thaliana
ATR0307G125 Amborella trichopoda
Atru.chr3.2860 Acer truncatum
AUR62001614 Chenopodium quinoa
AUR62020163 Chenopodium quinoa
BcaB05g22789 Brassica carinata
BcaB08g36485 Brassica carinata
BcaC03g13824 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p01200 Brassica napus
BolC2t07092H Brassica oleracea
BolC9t58364H Brassica oleracea
BraA02t05611Z Brassica rapa
BraA10t43978Z Brassica rapa
C02p10590 Brassica napus
C09p55010 Brassica napus
CAN.G864.4 Capsicum annuum
CANSAT54G2327 Cannabis sativa
CARHR191800 Cardamine hirsuta
Carub.0006s1937 Capsella rubella
Ca_06151_v3 Cicer arietinum L.
Cc01_g07550 Coffea canephora
CDE04G1732 Ceratophyllum demersum
CDE07G1923 Ceratophyllum demersum
CDE08G0206 Ceratophyllum demersum
Ciclev10016530m.g Citrus clementina
CiPaw.14G091700 Carya illinoinensis
ClCG03G014150 Citrullus lanatus
Cpa.g.sc103.65 Carica papaya
CsaV3_1G042110 Cucumis sativus L.
CSS0022741 Camellia sinensis var. sinensis
DCAR_002131 Daucus carota
DCAR_031602 Daucus carota
Dinv01011 Davidia involucrata
Dinv05232 Davidia involucrata
Dinv25746 Davidia involucrata
Duzib168G2211 Durio zibethinus
Duzib170G0448 Durio zibethinus
ECA240G4195 Erigeron canadensis
EL10Ac6g14714 Beta vulgaris
EL10Ac7g16218 Beta vulgaris
EL10Ac8g19914 Beta vulgaris
Eucgr.B03785 Eucalyptus grandis
FAN16G2078 Fragaria x ananassa
FAN17G0471 Fragaria x ananassa
FAN21G1454 Fragaria x ananassa
FAN21G3401 Fragaria x ananassa
FAN25G0803 Fragaria x ananassa
FvH4_3g27140 Fragaria vesca
Glyma.02G274200 Glycine max
Glyma.14G041900 Glycine max
Gohir.A05G101200 Gossypium hirsutum
Gohir.A08G000076 Gossypium hirsutum
Gohir.D05G101000 Gossypium hirsutum
Gohir.D08G008500 Gossypium hirsutum
Gohir.D11G235450 Gossypium hirsutum
Gorai.004G001700 Gossypium raimondii
Gorai.004G093900 Gossypium raimondii
Gorai.006G031100 Gossypium raimondii
Gorai.009G105100 Gossypium raimondii
GSVIVG01037452001 Vitis vinifera
HanXRQChr13g0420891 Helianthus annuus
Haze_23668 Corylus avellana
Hma1.2p1_0218F.1_g092630 Hydrangea macrophylla
HPP92_006662 Vanilla planifolia
Hund18832 Selenicereus undatus
Lalb_Chr17g0347491 Lupinus albus
Lj2A941G6 Lonicera japonica
Lj2C929T5 Lonicera japonica
Lj6g0018237 Lotus japonicus
LjContig00564g0012096 Lotus japonicus
Lsat_1_v5_gn_3_116100 Lactuca sativa
Manes.04G053600 Manihot esculenta
Manes.11G112200 Manihot esculenta
Mapoly0024s0118 Marchantia polymorpha
MBI13_g02397_MAGBIO Magnolia biondii
MBI19_g28105_MAGBIO Magnolia biondii
MD11G1180800 Malus domestica
Medtr5g087720 Medicago truncatula
MELO3C015629.2 Cucumis melo
Migut.N02419 Erythranthe guttata
MSTRG.12410 Avicennia marina
MSTRG.17662 Avicennia marina
Nitab4.5_0001183g0030 Nicotiana tabacum
Nitab4.5_0010431g0020 Nicotiana tabacum
Nn7g37297 Nelumbo nucifera
Oeu022226.2 Olea europaea
Oeu026660.1 Olea europaea
Os01g0277700 Oryza sativa ssp. japonica
Peaxi162Scf00217g00811 Petunia axillaris
PGR102G2321 Punica granatum
PGSC0003DMG400008707 Solanum tuberosum
PGSC0003DMG400018703 Solanum tuberosum
Phvul.008G207500 Phaseolus vulgaris
Potri.004G196600 Populus trichocarpa
Potri.009G158800 Populus trichocarpa
Pp3c19_11640 Physcomitrium patens
PRCOL_00002764 Prasinoderma coloniale
Prupe.6G153600 Prunus persica
Psat2g022840 Pisum sativum
PSO339G0009 Papaver somniferum
PSO384G4010 Papaver somniferum
QL01p020410 Quercus lobata
RcHm_v2.0_Chr5g0049761 Rosa chinensis
RcHm_v2.0_Chr5g0049771 Rosa chinensis
Rhsim13G0201000 Rhododendron simsii
Sabra04G0133300 Salix brachista
Sabra09G0124300 Salix brachista
SalBow3G0587 Salvia bowleyana
Sc21g0006500 Simmondsia chinensis
Sed0001894 Sechium edule
Sed0002058 Sechium edule
SEGI_02516 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07568 Striga asiatica
SGA_v2.0_scaffold79G25507 Striga asiatica
SHI25369 Sapria himalayana
SMO347G0469 Selaginella moellendorffii
Solyc01g009145.1 Solanum lycopersicum
Solyc11g071510.3 Solanum lycopersicum
Sopen01g004620 Solanum pennellii
Sopen11g029200 Solanum pennellii
Sp6g23450 Schrenkiella parvula
TAR369G0017 Trochodendron aralioides
TAR627G0830 Trochodendron aralioides
TAR636G0794 Trochodendron aralioides
THA.LOC104799587 Tarenaya hassleriana
THA.LOC104810964 Tarenaya hassleriana
Thecc.09G337400 Theobroma cacao
Thhalv10014597m.g Eutrema salsugineum
TPR.G11644 Trifolium pratense
TWI75G0877 Tripterygium wilfordii
TWI79G0087 Tripterygium wilfordii
unitig_27.g25021 Utricularia gibba
vmacro04109 Vaccinium macrocarpon
VMungo0647G2262 Vigna mungo
Zm00001eb128960 Zea mays

User provided reference genes

Program Settings