Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p34090 Brassica napus
A05p37870 Brassica napus
Aa31LG3G4790 Aethionema arabicum
Aa31LG3G4830 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.158 Anthoceros agrestis
Ah.16g107780 Amaranthus hybridus
AL3G23010 Arabidopsis lyrata
AL5G11970 Arabidopsis lyrata
Aqoxy3G03420 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.72V09J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W1QNQS Arachis hypogaea
AT2G02765 Arabidopsis thaliana
AT3G11470 Arabidopsis thaliana
ATR0618G287 Amborella trichopoda
Atru.chr8.1478 Acer truncatum
Atru.chr8.1769 Acer truncatum
AUR62006198 Chenopodium quinoa
AUR62015050 Chenopodium quinoa
AUR62017509 Chenopodium quinoa
AUR62037021 Chenopodium quinoa
BcaB06g25617 Brassica carinata
BcaB06g25618 Brassica carinata
BcaB06g25621 Brassica carinata
BcaB06g29561 Brassica carinata
BcaC05g28982 Brassica carinata
BcaC05g29371 Brassica carinata
BolC5t33871H Brassica oleracea
BolC5t34331H Brassica oleracea
BraA05t22230Z Brassica rapa
BraA05t22581Z Brassica rapa
C05p51840 Brassica napus
C05p56660 Brassica napus
CAN.G397.66 Capsicum annuum
CANSAT64G1535 Cannabis sativa
CARHR086010 Cardamine hirsuta
CARHR145210 Cardamine hirsuta
Carub.0003s1079 Capsella rubella
Carub.0005s0168 Capsella rubella
Ca_00895_v3 Cicer arietinum L.
CBR_g30340 Chara braunii
Cc06_g05990 Coffea canephora
Ciclev10011946m.g Citrus clementina
CiPaw.09G015400 Carya illinoinensis
ClCG08G004490 Citrullus lanatus
COL.COLO4_29702 Corchorus olitorius
Cpa.g.sc5.3 Carica papaya
Cre01.g018500 Chlamydomonas reinhardtii
CsaV3_6G003860 Cucumis sativus L.
CSS0000835 Camellia sinensis var. sinensis
DCAR_013399 Daucus carota
Dinv21192 Davidia involucrata
Dinv21195 Davidia involucrata
Duzib093G2169 Durio zibethinus
ECA247G3083 Erigeron canadensis
Eucgr.A02654 Eucalyptus grandis
FAN02G2546 Fragaria x ananassa
FAN05G3536 Fragaria x ananassa
FAN09G1525 Fragaria x ananassa
FAN12G1659 Fragaria x ananassa
FAN14G1754 Fragaria x ananassa
FAN22G2138 Fragaria x ananassa
FvH4_4g11630 Fragaria vesca
FvH4_6g19140 Fragaria vesca
Glyma.10G074300 Glycine max
Glyma.13G154600 Glycine max
Gohir.A01G205500 Gossypium hirsutum
Gohir.D01G195000 Gossypium hirsutum
Gorai.002G239100 Gossypium raimondii
GSVIVG01016776001 Vitis vinifera
HanXRQChr08g0212801 Helianthus annuus
Haze_12101 Corylus avellana
HPP92_018124 Vanilla planifolia
HPP92_018147 Vanilla planifolia
Hund01804 Selenicereus undatus
Hund15021 Selenicereus undatus
Lalb_Chr10g0096391 Lupinus albus
Lj2C139G10 Lonicera japonica
Lj2E139T0 Lonicera japonica
Lj5g0005733 Lotus japonicus
Lj6g0000791 Lotus japonicus
Lj6g0005905 Lotus japonicus
Lj6g0018590 Lotus japonicus
Lsat_1_v5_gn_9_20681 Lactuca sativa
Manes.08G026600 Manihot esculenta
Mapoly0006s0252 Marchantia polymorpha
MBI14_g17373_MAGBIO Magnolia biondii
MCO02G431 Micromonas commoda
MD12G1027200 Malus domestica
MD14G1027400 Malus domestica
Medtr1g059790 Medicago truncatula
Medtr8g095460 Medicago truncatula
MELO3C011647.2 Cucumis melo
Migut.J01020 Erythranthe guttata
Nitab4.5_0001933g0040 Nicotiana tabacum
Nitab4.5_0012129g0010 Nicotiana tabacum
Nn2g14484 Nelumbo nucifera
Oeu017686.1 Olea europaea
Oeu056875.2 Olea europaea
Os08g0243100 Oryza sativa ssp. japonica
Peaxi162Scf00096g00416 Petunia axillaris
Peaxi162Scf00102g00213 Petunia axillaris
PGR004G0063 Punica granatum
PGSC0003DMG402008870 Solanum tuberosum
Phvul.007G152100 Phaseolus vulgaris
Potri.006G211300 Populus trichocarpa
Potri.016G078400 Populus trichocarpa
Pp3c5_18920 Physcomitrium patens
PRCOL_00003909 Prasinoderma coloniale
Prupe.7G104300 Prunus persica
Psat6g079520 Pisum sativum
PSO063G5626 Papaver somniferum
PSO782G2273 Papaver somniferum
QL05p009399 Quercus lobata
RcHm_v2.0_Chr3g0474251 Rosa chinensis
Rhsim03G0072000 Rhododendron simsii
Rhsim03G0072700 Rhododendron simsii
Rhsim03G0074200 Rhododendron simsii
Sabra06G0126100 Salix brachista
Sabra06G0162900 Salix brachista
Sabra16G0082800 Salix brachista
SalBow3G3316 Salvia bowleyana
Sc02g0000340 Simmondsia chinensis
Sed0011362 Sechium edule
SEGI_18237 Sequoiadendron giganteum
SEGI_32763 Sequoiadendron giganteum
SGA_v2.0_scaffold31G12903 Striga asiatica
SMO118G0036 Selaginella moellendorffii
SMO144G0078 Selaginella moellendorffii
Solyc09g009960.3 Solanum lycopersicum
Sopen09g004710 Solanum pennellii
Sp3g09700 Schrenkiella parvula
Sp3g13570 Schrenkiella parvula
TAR365G0960 Trochodendron aralioides
THA.LOC104816589 Tarenaya hassleriana
Thecc.05G091100 Theobroma cacao
Thhalv10018973m.g Eutrema salsugineum
Thhalv10021266m.g Eutrema salsugineum
TPR.G14778 Trifolium pratense
TPR.G2549 Trifolium pratense
TWI53G1403 Tripterygium wilfordii
TWI77G0553 Tripterygium wilfordii
unitig_748.g8118 Utricularia gibba
vmacro07419 Vaccinium macrocarpon
VMungo0720G0644 Vigna mungo
VMungo0720G2492 Vigna mungo
VMungo1309G0892 Vigna mungo
Zm00001eb000710 Zea mays

User provided reference genes

Program Settings