Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p37240 Brassica napus
A10p02290 Brassica napus
Aa31LG1G8970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4439 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1082 Anthoceros agrestis
Actinidia11017 Actinidia chinensis
Actinidia11090 Actinidia chinensis
Ah.09g227990 Amaranthus hybridus
AL1G13310 Arabidopsis lyrata
Aqoxy4G00731 Aquilegia oxysepala
Aqoxy4G00799 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3GE2A8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KES1NF Arachis hypogaea
AT1G03760 Arabidopsis thaliana
ATR0763G277 Amborella trichopoda
Atru.chr6.2899 Acer truncatum
AUR62025873 Chenopodium quinoa
AUR62029845 Chenopodium quinoa
AUR62034810 Chenopodium quinoa
BcaB06g29108 Brassica carinata
BcaC01g05723 Brassica carinata
BcaC02g07427 Brassica carinata
BcaC03g18340 Brassica carinata
BcaC05g24513 Brassica carinata
BcaC07g36946 Brassica carinata
BcaC07g36947 Brassica carinata
BcaNung07287 Brassica carinata
BcaNung07372 Brassica carinata
BolC2t12481H Brassica oleracea
BolC4t28247H Brassica oleracea
BolC5t28987H Brassica oleracea
BolC8t46872H Brassica oleracea
BraA08t35622Z Brassica rapa
BraA10t42497Z Brassica rapa
C02p64170 Brassica napus
C04p67500 Brassica napus
C05p02100 Brassica napus
C08p00750 Brassica napus
C08p00760 Brassica napus
CAN.G209.35 Capsicum annuum
CANSAT64G0665 Cannabis sativa
CARHR003090 Cardamine hirsuta
Carub.0001s0286 Capsella rubella
Ca_18939_v3 Cicer arietinum L.
CBR_g73964 Chara braunii
Cc00_g12320 Coffea canephora
CDE02G0148 Ceratophyllum demersum
Ciclev10015278m.g Citrus clementina
Ciclev10015471m.g Citrus clementina
CiPaw.03G178700 Carya illinoinensis
ClCG02G017750 Citrullus lanatus
COL.COLO4_05946 Corchorus olitorius
Cpa.g.sc83.62 Carica papaya
Cre13.g576350 Chlamydomonas reinhardtii
CsaV3_6G012810 Cucumis sativus L.
CSS0036411 Camellia sinensis var. sinensis
CSS0044850 Camellia sinensis var. sinensis
DCAR_013025 Daucus carota
Dinv13395 Davidia involucrata
Duzib052G0489 Durio zibethinus
Duzib248G1083 Durio zibethinus
ECA234G2480 Erigeron canadensis
EL10Ac5g11143 Beta vulgaris
Eucgr.A01831 Eucalyptus grandis
FAN13G1308 Fragaria x ananassa
FAN18G1308 Fragaria x ananassa
FvH4_5g30750 Fragaria vesca
Glyma.12G116000 Glycine max
Glyma.12G137500 Glycine max
Gohir.A01G018800 Gossypium hirsutum
Gohir.A03G155650 Gossypium hirsutum
Gohir.D01G017400 Gossypium hirsutum
Gohir.D02G178750 Gossypium hirsutum
Gorai.002G019600 Gossypium raimondii
Gorai.005G200500 Gossypium raimondii
GSVIVG01020569001 Vitis vinifera
HanXRQChr15g0470251 Helianthus annuus
HanXRQChr16g0525341 Helianthus annuus
Haze_13200 Corylus avellana
HPP92_007017 Vanilla planifolia
Hund01029 Selenicereus undatus
Lalb_Chr03g0029531 Lupinus albus
Lj3g0009567 Lotus japonicus
Lj8A109T77 Lonicera japonica
Lj8C109T10 Lonicera japonica
Lsat_1_v5_gn_4_29780 Lactuca sativa
Manes.13G144900 Manihot esculenta
Mapoly0076s0049 Marchantia polymorpha
MapolyY_A0037 Marchantia polymorpha
MBI07_g40350_MAGBIO Magnolia biondii
MD09G1244900 Malus domestica
Medtr4g078505 Medicago truncatula
MELO3C013631.2 Cucumis melo
Migut.M00082 Erythranthe guttata
MSTRG.25027 Avicennia marina
Nitab4.5_0000638g0150 Nicotiana tabacum
Nitab4.5_0001752g0050 Nicotiana tabacum
Nitab4.5_0004959g0030 Nicotiana tabacum
Nitab4.5_0006721g0020 Nicotiana tabacum
Oeu023568.1 Olea europaea
Oeu035627.2 Olea europaea
Oeu044722.1 Olea europaea
Os01g0928300 Oryza sativa ssp. japonica
Peaxi162Scf01415g00032 Petunia axillaris
PGR042G3305 Punica granatum
PGSC0003DMG400032822 Solanum tuberosum
Phvul.011G115315 Phaseolus vulgaris
Potri.017G012500 Populus trichocarpa
Pp3c13_17680 Physcomitrium patens
Prupe.4G278300 Prunus persica
Psat0s876g0200 Pisum sativum
Psat7g169080 Pisum sativum
PSO210G2339 Papaver somniferum
PSO478G3970 Papaver somniferum
PSO832G2322 Papaver somniferum
QL08p039613 Quercus lobata
RcHm_v2.0_Chr4g0410421 Rosa chinensis
RcHm_v2.0_Chr7g0225641 Rosa chinensis
Rhsim06G0139500 Rhododendron simsii
RhsimUnG0145200 Rhododendron simsii
Sabra17G0010300 Salix brachista
Sc09g0004750 Simmondsia chinensis
Sc09g0006700 Simmondsia chinensis
Sed0010367 Sechium edule
SEGI_12795 Sequoiadendron giganteum
SEGI_15947 Sequoiadendron giganteum
SEGI_16677 Sequoiadendron giganteum
SGA_v2.0_scaffold108G30901 Striga asiatica
SMO115G0247 Selaginella moellendorffii
Solyc07g053860.3 Solanum lycopersicum
Sopen07g027830 Solanum pennellii
Sp1g02620 Schrenkiella parvula
TAR627G0112 Trochodendron aralioides
TAR629G1139 Trochodendron aralioides
THA.LOC104801168 Tarenaya hassleriana
THA.LOC104826035 Tarenaya hassleriana
Thecc.06G001400 Theobroma cacao
Thhalv10007808m.g Eutrema salsugineum
TPR.G20540 Trifolium pratense
TPR.G29254 Trifolium pratense
TWI59G1245 Tripterygium wilfordii
unitig_748.g8536 Utricularia gibba
vmacro15911 Vaccinium macrocarpon
vmacro15912 Vaccinium macrocarpon
VMungo1127G1891 Vigna mungo
Zm00001eb142460 Zea mays
Zm00001eb363750 Zea mays

User provided reference genes

Program Settings