Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p18150 Brassica napus
A10p18400 Brassica napus
Aa31LG1G13130 Aethionema arabicum
Actinidia25117 Actinidia chinensis
Actinidia35470 Actinidia chinensis
Actinidia37076 Actinidia chinensis
AL4G21340 Arabidopsis lyrata
AL6G33450 Arabidopsis lyrata
Aqoxy4G02728 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EYNG7S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GADS7N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NUG06Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XFIF97 Arachis hypogaea
AT2G27385 Arabidopsis thaliana
AT5G22430 Arabidopsis thaliana
ATR0580G107 Amborella trichopoda
Atru.chr3.3190 Acer truncatum
BcaB02g10088 Brassica carinata
BcaB05g22726 Brassica carinata
BcaC02g10869 Brassica carinata
BcaC03g13883 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p00660 Brassica napus
BolC2t07157H Brassica oleracea
BolC4t23920H Brassica oleracea
BolC9t58287H Brassica oleracea
BraA02t05659Z Brassica rapa
BraA07t29533Z Brassica rapa
BraA10t43921Z Brassica rapa
C02p10870 Brassica napus
C04p24220 Brassica napus
C09p54160 Brassica napus
CAN.G919.35 Capsicum annuum
CANSAT54G0919 Cannabis sativa
CARHR119990 Cardamine hirsuta
CARHR191100 Cardamine hirsuta
Carub.0004s0802 Capsella rubella
Carub.0006s2017 Capsella rubella
Cc01_g08910 Coffea canephora
Cfa009996 Carpinus fangiana
Ciclev10029378m.g Citrus clementina
CiPaw.13G134200 Carya illinoinensis
CiPaw.14G098700 Carya illinoinensis
ClCG01G012070 Citrullus lanatus
ClCG02G022270 Citrullus lanatus
COL.COLO4_34021 Corchorus olitorius
Cpa.g.sc195.13 Carica papaya
CsaV3_1G014930 Cucumis sativus L.
CsaV3_1G015850 Cucumis sativus L.
CsaV3_6G038400 Cucumis sativus L.
CSS0002660 Camellia sinensis var. sinensis
CSS0022586 Camellia sinensis var. sinensis
DCAR_010338 Daucus carota
DCAR_012208 Daucus carota
Dinv22825 Davidia involucrata
Dinv42535 Davidia involucrata
Duzib150G1383 Durio zibethinus
Duzib168G1438 Durio zibethinus
Duzib170G1118 Durio zibethinus
ECA248G3565 Erigeron canadensis
Eucgr.B03836 Eucalyptus grandis
FAN11G1413 Fragaria x ananassa
FAN21G3897 Fragaria x ananassa
FAN25G3715 Fragaria x ananassa
FvH4_3g25370 Fragaria vesca
Glyma.11G182100 Glycine max
Glyma.12G091100 Glycine max
Glyma.13G315400 Glycine max
Gohir.A05G079700 Gossypium hirsutum
Gohir.D05G082600 Gossypium hirsutum
Gorai.009G084200 Gossypium raimondii
GSVIVG01036094001 Vitis vinifera
HanXRQChr01g0024471 Helianthus annuus
HanXRQChr13g0426031 Helianthus annuus
Haze_23356 Corylus avellana
Hma1.2p1_0587F.1_g184070 Hydrangea macrophylla
HPP92_005471 Vanilla planifolia
HPP92_011908 Vanilla planifolia
Hund18768 Selenicereus undatus
Hund20930 Selenicereus undatus
Lalb_Chr01g0004911 Lupinus albus
Lalb_Chr03g0028181 Lupinus albus
Lalb_Chr19g0136401 Lupinus albus
Lj2P968T16 Lonicera japonica
Lj3g0002892 Lotus japonicus
Lj3g0016581 Lotus japonicus
Lsat_1_v5_gn_1_59041 Lactuca sativa
Manes.04G002101 Manihot esculenta
Manes.11G163300 Manihot esculenta
MBI17_g32417_MAGBIO Magnolia biondii
MD03G1148100 Malus domestica
MD11G1167600 Malus domestica
Medtr2g086680 Medicago truncatula
MELO3C004693.2 Cucumis melo
MELO3C014504.2 Cucumis melo
Migut.D02434 Erythranthe guttata
MSTRG.17701 Avicennia marina
MSTRG.18766 Avicennia marina
MSTRG.21034 Avicennia marina
Nitab4.5_0000937g0070 Nicotiana tabacum
Nitab4.5_0005472g0010 Nicotiana tabacum
Nn2g14215 Nelumbo nucifera
Oeu002365.1 Olea europaea
Oeu027156.1 Olea europaea
Oeu035569.1 Olea europaea
Os02g0535300 Oryza sativa ssp. japonica
Peaxi162Scf00091g00622 Petunia axillaris
PGR102G3267 Punica granatum
PGSC0003DMG400005884 Solanum tuberosum
Phvul.005G122600 Phaseolus vulgaris
Phvul.011G095400 Phaseolus vulgaris
Potri.009G019300 Populus trichocarpa
Prupe.6G134300 Prunus persica
Psat5g259000 Pisum sativum
Psat7g142160 Pisum sativum
QL01p011973 Quercus lobata
QL01p011978 Quercus lobata
QL01p011992 Quercus lobata
Rhsim01G0204600 Rhododendron simsii
Rhsim13G0112900 Rhododendron simsii
Sabra09G0012800 Salix brachista
SalBow6G3038 Salvia bowleyana
Sc06g0008710 Simmondsia chinensis
Sed0010097 Sechium edule
SGA_v2.0_scaffold22G09852 Striga asiatica
Solyc06g074260.4 Solanum lycopersicum
Sopen06g030680 Solanum pennellii
Sp4g10180 Schrenkiella parvula
Sp6g22820 Schrenkiella parvula
TAR369G1010 Trochodendron aralioides
TAR623G0362 Trochodendron aralioides
THA.LOC104800521 Tarenaya hassleriana
THA.LOC104810920 Tarenaya hassleriana
Thecc.09G280200 Theobroma cacao
Thhalv10002110m.g Eutrema salsugineum
Thhalv10014830m.g Eutrema salsugineum
TPR.G17227 Trifolium pratense
TPR.G4458 Trifolium pratense
TWI31G0848 Tripterygium wilfordii
TWI79G0870 Tripterygium wilfordii
unitig_0.g1474 Utricularia gibba
unitig_746.g26607 Utricularia gibba
vmacro03324 Vaccinium macrocarpon
vmacro14345 Vaccinium macrocarpon
vmacro14354 Vaccinium macrocarpon
VMungo1080G1295 Vigna mungo
VMungo1127G0906 Vigna mungo
Zm00001eb242880 Zea mays

User provided reference genes

Program Settings