Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p41600 Brassica napus
Aa31LG2G5630 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.35 Anthoceros agrestis
Actinidia18328 Actinidia chinensis
Actinidia18329 Actinidia chinensis
Actinidia25549 Actinidia chinensis
Actinidia25550 Actinidia chinensis
Actinidia36228 Actinidia chinensis
Ah.02g119630 Amaranthus hybridus
Ah.03g148260 Amaranthus hybridus
AL5G15980 Arabidopsis lyrata
Aqoxy5G03244_Aqoxy5G03245 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B1CDD0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JMV5LB Arachis hypogaea
AT3G26950 Arabidopsis thaliana
ATR0582G106 Amborella trichopoda
Atru.chr6.2612 Acer truncatum
Atru.chr6.2613 Acer truncatum
Atru.chr6.2614 Acer truncatum
AUR62003394 Chenopodium quinoa
AUR62029433 Chenopodium quinoa
BcaC06g31032 Brassica carinata
BcaC06g33873 Brassica carinata
BolC7t44120H Brassica oleracea
BraA06t27085Z Brassica rapa
C07p36060 Brassica napus
CANSAT21G1015 Cannabis sativa
CARHR148130 Cardamine hirsuta
Carub.0005s0514 Capsella rubella
Ca_07318_v3 Cicer arietinum L.
Cc07_g01060 Coffea canephora
CDE05G2066 Ceratophyllum demersum
CDE06G1277 Ceratophyllum demersum
Cfa007197 Carpinus fangiana
Ciclev10014761m.g Citrus clementina
CiPaw.03G004800 Carya illinoinensis
ClCG01G008700 Citrullus lanatus
COL.COLO4_13307 Corchorus olitorius
Cpa.g.sc70.110 Carica papaya
CsaV3_5G024330 Cucumis sativus L.
CSS0029044 Camellia sinensis var. sinensis
CSS0040735 Camellia sinensis var. sinensis
CSS0042485 Camellia sinensis var. sinensis
CSS0048130 Camellia sinensis var. sinensis
DCAR_007509 Daucus carota
DCAR_015209 Daucus carota
Dinv23186 Davidia involucrata
Dinv23187 Davidia involucrata
Dinv33309 Davidia involucrata
Dinv33310 Davidia involucrata
Duzib147G0369 Durio zibethinus
Duzib264G1310 Durio zibethinus
ECA246G1012 Erigeron canadensis
ECA246G4542 Erigeron canadensis
EL10Ac6g15451 Beta vulgaris
Eucgr.I01623 Eucalyptus grandis
FAN02G1943 Fragaria x ananassa
FAN05G0264 Fragaria x ananassa
FAN05G2765 Fragaria x ananassa
FAN09G0463 Fragaria x ananassa
FAN14G3030 Fragaria x ananassa
FvH4_6g53950 Fragaria vesca
Glyma.02G065000 Glycine max
Glyma.16G052500 Glycine max
Glyma.16G146100 Glycine max
Glyma.19G097001 Glycine max
Glyma.19G097101 Glycine max
Gohir.A07G231500 Gossypium hirsutum
Gohir.A09G038300 Gossypium hirsutum
Gohir.D07G238700 Gossypium hirsutum
Gohir.D09G039750 Gossypium hirsutum
Gohir.D09G039801 Gossypium hirsutum
Gorai.001G274700 Gossypium raimondii
Gorai.006G044700 Gossypium raimondii
GSVIVG01008594001 Vitis vinifera
GSVIVG01033038001 Vitis vinifera
HanXRQChr05g0155591 Helianthus annuus
HanXRQChr17g0551611 Helianthus annuus
Haze_14911 Corylus avellana
Hma1.2p1_0093F.1_g046930 Hydrangea macrophylla
HPP92_009880 Vanilla planifolia
HPP92_009881 Vanilla planifolia
HPP92_009891 Vanilla planifolia
HPP92_009897 Vanilla planifolia
Lalb_Chr00c40g0412501 Lupinus albus
Lj1g0026609 Lotus japonicus
Lj2g0026571 Lotus japonicus
Lj5A92G44 Lonicera japonica
Lj5A92G45 Lonicera japonica
Lj7A613T64 Lonicera japonica
Lsat_1_v5_gn_0_23961 Lactuca sativa
Lsat_1_v5_gn_5_10960 Lactuca sativa
Lsat_1_v5_gn_5_59781 Lactuca sativa
Manes.04G087600 Manihot esculenta
MD09G1007000 Malus domestica
MD17G1010700 Malus domestica
Medtr7g026520 Medicago truncatula
MELO3C025087.2 Cucumis melo
Migut.F00035 Erythranthe guttata
Nitab4.5_0011381g0040 Nicotiana tabacum
Nitab4.5_0011717g0030 Nicotiana tabacum
Nn3g16360 Nelumbo nucifera
Oeu020395.1 Olea europaea
Os11g0507400 Oryza sativa ssp. japonica
Peaxi162Scf00331g00014 Petunia axillaris
PGR142G1816 Punica granatum
PGSC0003DMG400013660 Solanum tuberosum
Phvul.001G090000 Phaseolus vulgaris
Phvul.004G070700 Phaseolus vulgaris
Potri.001G325500 Populus trichocarpa
Pp3c1_35010 Physcomitrium patens
Pp3c21_14570 Physcomitrium patens
Prupe.3G297400 Prunus persica
Prupe.3G310100 Prunus persica
Psat3g181600 Pisum sativum
PSO017G6125 Papaver somniferum
PSO063G6475 Papaver somniferum
PSO478G4366 Papaver somniferum
QL02p070577 Quercus lobata
RcHm_v2.0_Chr2g0176111 Rosa chinensis
Rhsim08G0041000 Rhododendron simsii
Sabra16G0208000 Salix brachista
SalBow4G0131 Salvia bowleyana
Sc09g0007730 Simmondsia chinensis
Sed0022814 Sechium edule
SEGI_15377 Sequoiadendron giganteum
SGA_v2.0_scaffold253G45172 Striga asiatica
SHI04027 Sapria himalayana
SMO180G0002 Selaginella moellendorffii
Solyc02g082210.4 Solanum lycopersicum
Sopen02g026870 Solanum pennellii
Sp2g16080 Schrenkiella parvula
TAR629G0447 Trochodendron aralioides
THA.LOC104805319 Tarenaya hassleriana
THA.LOC104813335 Tarenaya hassleriana
THA.LOC104825638 Tarenaya hassleriana
Thecc.04G041900 Theobroma cacao
Thhalv10003939m.g Eutrema salsugineum
TWI34G0688 Tripterygium wilfordii
TWI34G1796 Tripterygium wilfordii
TWI60G0613 Tripterygium wilfordii
unitig_0.g1913 Utricularia gibba
unitig_52.g16892 Utricularia gibba
vmacro18364 Vaccinium macrocarpon
vmacro19146 Vaccinium macrocarpon
VMungo0464G0185 Vigna mungo
VMungo1383G1917 Vigna mungo

User provided reference genes

Program Settings