Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p43600 Brassica napus
A07p08000 Brassica napus
Aa31LG8G11040 Aethionema arabicum
Aa31LG8G9420 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1541 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5458 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5527 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1701 Anthoceros agrestis
Actinidia37761 Actinidia chinensis
Ah.10g026170 Amaranthus hybridus
AL3G39760 Arabidopsis lyrata
Aqoxy5G00133 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4HQ694 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z186RR Arachis hypogaea
AT3G24315 Arabidopsis thaliana
ATR0787G185 Amborella trichopoda
Atru.chr12.1207 Acer truncatum
AUR62015240 Chenopodium quinoa
AUR62018036 Chenopodium quinoa
BcaB06g26613 Brassica carinata
BcaC01g03326 Brassica carinata
BcaC06g35682 Brassica carinata
BolC3t17623H Brassica oleracea
BolC7t41674H Brassica oleracea
BraA03t13497Z Brassica rapa
BraA07t28587Z Brassica rapa
C03p53630 Brassica napus
C07p12060 Brassica napus
CAN.G812.17 Capsicum annuum
CANSAT78G2207 Cannabis sativa
CARHR100410 Cardamine hirsuta
Carub.0003s2465 Capsella rubella
Ca_11361_v3 Cicer arietinum L.
CBR_g37523 Chara braunii
Cc03_g06480 Coffea canephora
CDE02G3615 Ceratophyllum demersum
CDE09G0962 Ceratophyllum demersum
Cfa014795 Carpinus fangiana
Ciclev10005541m.g Citrus clementina
CiPaw.01G176900 Carya illinoinensis
CiPaw.02G105900 Carya illinoinensis
ClCG06G002570 Citrullus lanatus
COL.COLO4_15983 Corchorus olitorius
Cpa.g.sc59.14 Carica papaya
Cre02.g090650 Chlamydomonas reinhardtii
CsaV3_6G008560 Cucumis sativus L.
CSS0019941 Camellia sinensis var. sinensis
CSS0043447 Camellia sinensis var. sinensis
DCAR_030764 Daucus carota
Dinv27121 Davidia involucrata
Dinv30772 Davidia involucrata
Duzib052G0859 Durio zibethinus
ECA247G3419 Erigeron canadensis
EL10Ac3g06678 Beta vulgaris
Eucgr.G00566 Eucalyptus grandis
Eucgr.K00416 Eucalyptus grandis
FAN04G2658 Fragaria x ananassa
FAN08G3625 Fragaria x ananassa
FAN13G1436 Fragaria x ananassa
FAN18G4219 Fragaria x ananassa
FvH4_5g17100 Fragaria vesca
Glyma.09G019100 Glycine max
Glyma.15G125200 Glycine max
Gohir.A02G043600 Gossypium hirsutum
Gohir.D02G049200 Gossypium hirsutum
Gorai.005G054400 Gossypium raimondii
GSVIVG01027934001 Vitis vinifera
HanXRQChr01g0011201 Helianthus annuus
Haze_11479 Corylus avellana
HPP92_021768 Vanilla planifolia
Hund22254 Selenicereus undatus
Lalb_Chr06g0169571 Lupinus albus
Lj3g0001784 Lotus japonicus
Lj6A637G59 Lonicera japonica
Lj6g0009036 Lotus japonicus
Lsat_1_v5_gn_1_75501 Lactuca sativa
Manes.03G102500 Manihot esculenta
Mapoly0019s0137 Marchantia polymorpha
MCO03G437 Micromonas commoda
MD06G1229400 Malus domestica
Medtr2g028660 Medicago truncatula
MELO3C022272.2 Cucumis melo
Migut.G00562 Erythranthe guttata
MSTRG.9850 Avicennia marina
Nitab4.5_0001041g0140 Nicotiana tabacum
Nitab4.5_0002613g0070 Nicotiana tabacum
Nitab4.5_0005154g0050 Nicotiana tabacum
Nn3g19843 Nelumbo nucifera
Oeu047122.2 Olea europaea
Os02g0658900 Oryza sativa ssp. japonica
Peaxi162Scf00531g00334 Petunia axillaris
PGSC0003DMG400001501 Solanum tuberosum
Phvul.006G132800 Phaseolus vulgaris
Phvul.006G133300 Phaseolus vulgaris
Potri.010G064900 Populus trichocarpa
Pp3c16_3280 Physcomitrium patens
Pp3c27_3370 Physcomitrium patens
PRCOL_00001816 Prasinoderma coloniale
Prupe.5G230500 Prunus persica
Psat1g170520 Pisum sativum
Psat7g046400 Pisum sativum
PSO170G5569 Papaver somniferum
PSO302G0040 Papaver somniferum
PSO764G0108 Papaver somniferum
PSO832G1873 Papaver somniferum
QL06p021548 Quercus lobata
QL08p018871 Quercus lobata
RcHm_v2.0_Chr7g0178711 Rosa chinensis
Rhsim01G0226300 Rhododendron simsii
Sabra10G0042100 Salix brachista
SalBow2G1408 Salvia bowleyana
Sc13g0003090 Simmondsia chinensis
Sed0020820 Sechium edule
SEGI_01035 Sequoiadendron giganteum
SGA_v2.0_scaffold127G34013 Striga asiatica
SGA_v2.0_scaffold193G40717 Striga asiatica
SGA_v2.0_scaffold454G51888 Striga asiatica
SHI00826 Sapria himalayana
SMO364G0891 Selaginella moellendorffii
Solyc09g090860.4 Solanum lycopersicum
Sopen09g033820 Solanum pennellii
Sp3g22120 Schrenkiella parvula
TAR365G0288 Trochodendron aralioides
THA.LOC104808740 Tarenaya hassleriana
THA.LOC104810405 Tarenaya hassleriana
Thecc.04G266700 Theobroma cacao
Thhalv10002630m.g Eutrema salsugineum
TPR.G17506 Trifolium pratense
TWI09G0526 Tripterygium wilfordii
TWI63G1490 Tripterygium wilfordii
unitig_748.g8292 Utricularia gibba
unitig_748.g8293 Utricularia gibba
vmacro04848 Vaccinium macrocarpon
vmacro20979 Vaccinium macrocarpon
VMungo0540G0767 Vigna mungo
Zm00001eb021120 Zea mays
Zm00001eb048840 Zea mays
Zm00001eb049220 Zea mays
Zm00001eb144710 Zea mays
Zm00001eb156410 Zea mays
Zm00001eb188010 Zea mays
Zm00001eb238020 Zea mays
Zm00001eb291560 Zea mays
Zm00001eb318660 Zea mays
Zm00001eb324110 Zea mays
Zm00001eb402860 Zea mays
Zm00001eb423240 Zea mays

User provided reference genes

Program Settings