Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p44960 Brassica napus
Aa31LG9G5470 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.677 Anthoceros agrestis
Actinidia02116 Actinidia chinensis
Actinidia05198 Actinidia chinensis
Ah.12g056670 Amaranthus hybridus
AL8G10400 Arabidopsis lyrata
Aqoxy7G00738 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1R27RR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CZL3S8 Arachis hypogaea
AT5G47570 Arabidopsis thaliana
ATR0105G007 Amborella trichopoda
Atru.chr9.1362 Acer truncatum
AUR62007498 Chenopodium quinoa
BcaB07g30770 Brassica carinata
BcaC03g16973 Brassica carinata
BcaC04g21614 Brassica carinata
BcaC06g31367 Brassica carinata
BcaC06g31372 Brassica carinata
BolC2t10971H Brassica oleracea
BolC7t43663H Brassica oleracea
BraA02t08146Z Brassica rapa
BraA06t27367Z Brassica rapa
CAN.G1218.6 Capsicum annuum
CANSAT21G2488 Cannabis sativa
CARHR173780 Cardamine hirsuta
Carub.0008s0021 Capsella rubella
Ca_21953_v3 Cicer arietinum L.
CBR_g50946 Chara braunii
Cc08_g12730 Coffea canephora
CDE02G1099 Ceratophyllum demersum
CDE11G0582 Ceratophyllum demersum
Cfa012751 Carpinus fangiana
Ciclev10022867m.g Citrus clementina
CiPaw.11G152200 Carya illinoinensis
CiPaw.12G108400 Carya illinoinensis
ClCG10G002830 Citrullus lanatus
COL.COLO4_37193 Corchorus olitorius
COL.COLO4_37195 Corchorus olitorius
Cpa.g.sc276.5 Carica papaya
CsaV3_3G002850 Cucumis sativus L.
CSS0026368 Camellia sinensis var. sinensis
DCAR_027789 Daucus carota
Dinv21616 Davidia involucrata
Dinv39123 Davidia involucrata
Duzib084G0333 Durio zibethinus
Duzib205G1156 Durio zibethinus
ECA233G3117 Erigeron canadensis
EL10Ac5g13047 Beta vulgaris
Eucgr.E00445 Eucalyptus grandis
FAN02G0882 Fragaria x ananassa
FAN05G0157 Fragaria x ananassa
FAN05G1737 Fragaria x ananassa
FAN09G2413 Fragaria x ananassa
FAN14G3965 Fragaria x ananassa
FvH4_6g09560 Fragaria vesca
FvH4_6g27850 Fragaria vesca
Glyma.05G058000 Glycine max
Glyma.17G140500 Glycine max
Gohir.A08G171800 Gossypium hirsutum
Gohir.A12G219800 Gossypium hirsutum
Gohir.D08G190100 Gossypium hirsutum
Gohir.D12G221900 Gossypium hirsutum
Gorai.004G200300 Gossypium raimondii
Gorai.008G237800 Gossypium raimondii
GSVIVG01001301001 Vitis vinifera
HanXRQChr13g0396371 Helianthus annuus
Haze_07877 Corylus avellana
Haze_07879 Corylus avellana
Hma1.2p1_1414F.1_g281930 Hydrangea macrophylla
HPP92_012813 Vanilla planifolia
Hund11615 Selenicereus undatus
Hund14589 Selenicereus undatus
Lalb_Chr05g0225721 Lupinus albus
Lalb_Chr09g0334171 Lupinus albus
Lj2C215G2 Lonicera japonica
Lj4g0006403 Lotus japonicus
Lsat_1_v5_gn_6_2981 Lactuca sativa
Manes.01G079000 Manihot esculenta
Manes.02G037900 Manihot esculenta
Mapoly0086s0019 Marchantia polymorpha
MBI02_g00644_MAGBIO Magnolia biondii
MBI02_g36452_MAGBIO Magnolia biondii
MBI11_g37068_MAGBIO Magnolia biondii
MCO13G524 Micromonas commoda
MD09G1234000 Malus domestica
MD17G1263200 Malus domestica
Medtr4g101140 Medicago truncatula
MELO3C013951.2 Cucumis melo
Migut.A00959 Erythranthe guttata
MSTRG.12083 Avicennia marina
Nitab4.5_0000312g0250 Nicotiana tabacum
Nitab4.5_0003531g0010 Nicotiana tabacum
Nitab4.5_0007493g0020 Nicotiana tabacum
Nn1g01053 Nelumbo nucifera
Nn6g34007 Nelumbo nucifera
Oeu006279.1 Olea europaea
Oeu011653.1 Olea europaea
Os10g0551600 Oryza sativa ssp. japonica
Peaxi162Scf00002g01216 Petunia axillaris
PGR042G3212 Punica granatum
PGSC0003DMG400004750 Solanum tuberosum
PGSC0003DMG400004799 Solanum tuberosum
Phvul.001G061600 Phaseolus vulgaris
Phvul.003G219300 Phaseolus vulgaris
Potri.001G122200 Populus trichocarpa
Pp3c20_8820 Physcomitrium patens
Prupe.3G111600 Prunus persica
Psat4g070000 Pisum sativum
PSO017G3938 Papaver somniferum
PSO478G0216 Papaver somniferum
QL12p012809 Quercus lobata
QL12p012843 Quercus lobata
RcHm_v2.0_Chr1g0326801 Rosa chinensis
RcHm_v2.0_Chr1g0345201 Rosa chinensis
RcHm_v2.0_Chr2g0109601 Rosa chinensis
RcHm_v2.0_Chr2g0112371 Rosa chinensis
RcHm_v2.0_Chr2g0131201 Rosa chinensis
RcHm_v2.0_Chr4g0420451 Rosa chinensis
RcHm_v2.0_Chr5g0051271 Rosa chinensis
RcHm_v2.0_Chr6g0244011 Rosa chinensis
Rhsim07G0073000 Rhododendron simsii
Rhsim07G0106400 Rhododendron simsii
Rhsim07G0107000 Rhododendron simsii
Sabra01G0094100 Salix brachista
SalBow4G2670 Salvia bowleyana
SalBow8G2639 Salvia bowleyana
Sc22g0000770 Simmondsia chinensis
Sed0015074 Sechium edule
Sed0017508 Sechium edule
SEGI_05699 Sequoiadendron giganteum
SGA_v2.0_scaffold146G36159 Striga asiatica
SMO119G0354 Selaginella moellendorffii
Solyc08g078860.4 Solanum lycopersicum
Sopen08g027330 Solanum pennellii
Sp2g12300 Schrenkiella parvula
TAR374G1281 Trochodendron aralioides
THA.LOC104798464 Tarenaya hassleriana
THA.LOC104806732 Tarenaya hassleriana
Thecc.03G254700 Theobroma cacao
Thhalv10001074m.g Eutrema salsugineum
TWI15G0944 Tripterygium wilfordii
TWI60G0435 Tripterygium wilfordii
unitig_736.g22564 Utricularia gibba
vmacro14093 Vaccinium macrocarpon
Zm00001eb023020 Zea mays
Zm00001eb391700 Zea mays

User provided reference genes

Program Settings