Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p37450 Brassica napus
Aa31LG1G9370 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.961 Anthoceros agrestis
Actinidia00750 Actinidia chinensis
Actinidia09139 Actinidia chinensis
Ah.15g091940 Amaranthus hybridus
AL1G12650 Arabidopsis lyrata
Aqoxy2G03326 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2R7T4K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8W9TWR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TN9YNV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VTSW9N Arachis hypogaea
AT1G03160 Arabidopsis thaliana
ATR0626G051 Amborella trichopoda
Atru.chr5.1434 Acer truncatum
AUR62036827 Chenopodium quinoa
AUR62043137 Chenopodium quinoa
AUR62043138 Chenopodium quinoa
AUR62043139 Chenopodium quinoa
BolC8t46843H Brassica oleracea
BraA08t35643Z Brassica rapa
C08p00440 Brassica napus
CAN.G242.2 Capsicum annuum
CANSAT25G0791 Cannabis sativa
CARHR002500 Cardamine hirsuta
Carub.0001s0230 Capsella rubella
Ca_09758_v3 Cicer arietinum L.
CBR_g4009 Chara braunii
Cc01_g19500 Coffea canephora
CDE06G0317 Ceratophyllum demersum
Cfa006136 Carpinus fangiana
Ciclev10023868m.g Citrus clementina
CiPaw.07G091400 Carya illinoinensis
ClCG07G000240 Citrullus lanatus
COL.COLO4_09099 Corchorus olitorius
Cpa.g.c38803 Carica papaya
Cpa.g.c40412 Carica papaya
Cpa.g.c44243 Carica papaya
Cpa.g.sc370.1 Carica papaya
Cpa.g.sc52.38 Carica papaya
Cre14.g616600 Chlamydomonas reinhardtii
CsaV3_6G037120 Cucumis sativus L.
CSS0045500 Camellia sinensis var. sinensis
DCAR_002736 Daucus carota
Dinv32937 Davidia involucrata
Duzib133G0424 Durio zibethinus
Duzib133G0542 Durio zibethinus
Duzib138G0773 Durio zibethinus
ECA247G0546 Erigeron canadensis
EL10Ac7g17230 Beta vulgaris
Eucgr.H01482 Eucalyptus grandis
FAN15G1882 Fragaria x ananassa
FAN20G2556 Fragaria x ananassa
FAN24G2260 Fragaria x ananassa
FAN27G2515 Fragaria x ananassa
FvH4_2g23600 Fragaria vesca
Glyma.02G147400 Glycine max
Glyma.10G026400 Glycine max
Glyma.18G167550 Glycine max
Gohir.A08G067500 Gossypium hirsutum
Gohir.D08G075900 Gossypium hirsutum
Gorai.004G080200 Gossypium raimondii
GSVIVG01011085001 Vitis vinifera
HanXRQChr10g0282661 Helianthus annuus
Haze_04712 Corylus avellana
Hma1.2p1_0257F.1_g103450 Hydrangea macrophylla
Hma1.2p1_0536F.1_g174110 Hydrangea macrophylla
Hund05340 Selenicereus undatus
Hund05341 Selenicereus undatus
Hund05342 Selenicereus undatus
Hund05386 Selenicereus undatus
Lalb_Chr02g0142771 Lupinus albus
Lalb_Chr02g0142781 Lupinus albus
Lj2A1173G9 Lonicera japonica
Lj5g0021757 Lotus japonicus
Lsat_1_v5_gn_9_3760 Lactuca sativa
Manes.05G076137 Manihot esculenta
Mapoly0002s0267 Marchantia polymorpha
MBI19_g21295_MAGBIO Magnolia biondii
MCO02G198 Micromonas commoda
MD00G1063200 Malus domestica
MD11G1286100 Malus domestica
MD11G1311300 Malus domestica
MD11G1311400 Malus domestica
MD11G1311600 Malus domestica
MD11G1311700 Malus domestica
MD11G1312200 Malus domestica
Medtr1g072270 Medicago truncatula
Medtr8g104420 Medicago truncatula
MELO3C014400.2 Cucumis melo
MELO3C014401.2 Cucumis melo
Migut.D00294 Erythranthe guttata
Migut.D00341 Erythranthe guttata
MSTRG.21562 Avicennia marina
Nitab4.5_0000458g0050 Nicotiana tabacum
Nitab4.5_0008435g0030 Nicotiana tabacum
Oeu022870.1 Olea europaea
Os05g0390100 Oryza sativa ssp. japonica
Peaxi162Scf01607g00116 Petunia axillaris
PGR119G0033 Punica granatum
PGSC0003DMG400012881 Solanum tuberosum
Phvul.007G172000 Phaseolus vulgaris
Potri.002G053332 Populus trichocarpa
Potri.002G053366 Populus trichocarpa
Potri.005G209200 Populus trichocarpa
Pp3c10_17390 Physcomitrium patens
Pp3c3_25850 Physcomitrium patens
PRCOL_00001755 Prasinoderma coloniale
Prupe.2G059500 Prunus persica
Prupe.8G241300 Prunus persica
Psat6g060000 Pisum sativum
PSO170G0567 Papaver somniferum
PSO302G0140 Papaver somniferum
QL12p021914 Quercus lobata
RcHm_v2.0_Chr6g0291071 Rosa chinensis
Rhsim13G0024600 Rhododendron simsii
Sabra02G0043400 Salix brachista
Sabra04G0115100 Salix brachista
Sabra05G0150000 Salix brachista
Sabra05G0159300 Salix brachista
SalBow4G0282 Salvia bowleyana
Sc05g0004960 Simmondsia chinensis
Sed0025205 Sechium edule
SEGI_13636 Sequoiadendron giganteum
SEGI_14404 Sequoiadendron giganteum
SEGI_20481 Sequoiadendron giganteum
SEGI_24308 Sequoiadendron giganteum
SEGI_30935 Sequoiadendron giganteum
SEGI_37612 Sequoiadendron giganteum
SEGI_40401 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05809 Striga asiatica
SGA_v2.0_scaffold1G00471 Striga asiatica
SMO147G0152 Selaginella moellendorffii
Solyc09g065160.4 Solanum lycopersicum
Sopen09g026860 Solanum pennellii
Sp1g02185 Schrenkiella parvula
TAR362G0796 Trochodendron aralioides
TAR633G0362 Trochodendron aralioides
THA.LOC104801235 Tarenaya hassleriana
Thecc.01G279600 Theobroma cacao
Thhalv10006729m.g Eutrema salsugineum
TPR.G9125 Trifolium pratense
TWI23G0916 Tripterygium wilfordii
unitig_0.g1141 Utricularia gibba
vmacro02569 Vaccinium macrocarpon
VMungo0720G0024 Vigna mungo
Zm00001eb287190 Zea mays

User provided reference genes

Program Settings