Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p39050 Brassica napus
Aa31LG3G2470 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2042 Anthoceros agrestis
Actinidia05448 Actinidia chinensis
Ah.06g189980 Amaranthus hybridus
Ah.06g189990 Amaranthus hybridus
AL3G21240 Arabidopsis lyrata
AL3G21250 Arabidopsis lyrata
AL7G30480 Arabidopsis lyrata
Aqoxy4G02848 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.133YU3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ARK388 Arachis hypogaea
AT3G09960 Arabidopsis thaliana
AT3G09970 Arabidopsis thaliana
ATR0820G022 Amborella trichopoda
Atru.chr8.1610 Acer truncatum
AUR62033539 Chenopodium quinoa
BcaB02g09662 Brassica carinata
BcaC05g29512 Brassica carinata
BcaC05g29723 Brassica carinata
BcaC05g29724 Brassica carinata
BcaC06g33893 Brassica carinata
BolC5t34464H Brassica oleracea
BolC5t34465H Brassica oleracea
BraA05t22697Z Brassica rapa
C05p58070 Brassica napus
C05p58080 Brassica napus
CAN.G397.3 Capsicum annuum
CAN.G824.21 Capsicum annuum
CANSAT51G0008 Cannabis sativa
CANSAT51G0010 Cannabis sativa
CANSAT51G0015 Cannabis sativa
CARHR084470 Cardamine hirsuta
CARHR084480 Cardamine hirsuta
Carub.0003s0907 Capsella rubella
Ca_11632_v3 Cicer arietinum L.
CBR_g20302 Chara braunii
Cc06_g05420 Coffea canephora
CDE02G4719 Ceratophyllum demersum
Cfa016561 Carpinus fangiana
Ciclev10012289m.g Citrus clementina
CiPaw.10G006700 Carya illinoinensis
ClCG10G019200 Citrullus lanatus
COL.COLO4_29793 Corchorus olitorius
Cpa.g.sc5.61 Carica papaya
CsaV3_3G036990 Cucumis sativus L.
CsaV3_3G040830 Cucumis sativus L.
CSS0041742 Camellia sinensis var. sinensis
DCAR_007746 Daucus carota
DCAR_013370 Daucus carota
DCAR_013371 Daucus carota
DCAR_013372 Daucus carota
Dinv21237 Davidia involucrata
Duzib093G0109 Durio zibethinus
Duzib093G0628 Durio zibethinus
ECA238G1993 Erigeron canadensis
ECA238G3195 Erigeron canadensis
EL10Ac7g16967 Beta vulgaris
Eucgr.A01531 Eucalyptus grandis
FAN09G4215 Fragaria x ananassa
FAN14G2314 Fragaria x ananassa
FvH4_6g18140 Fragaria vesca
Glyma.10G067302 Glycine max
Glyma.U031320 Glycine max
Gohir.A04G062650 Gossypium hirsutum
Gohir.A04G065328 Gossypium hirsutum
Gohir.D04G102500 Gossypium hirsutum
Gohir.D04G102800 Gossypium hirsutum
Gorai.009G405800 Gossypium raimondii
Gorai.009G406100 Gossypium raimondii
GSVIVG01033803001 Vitis vinifera
HanXRQChr14g0432521 Helianthus annuus
HPP92_007823 Vanilla planifolia
Hund04015 Selenicereus undatus
Lalb_Chr21g0315581 Lupinus albus
Lj2A132T56 Lonicera japonica
Lj5g0003292 Lotus japonicus
Lsat_1_v5_gn_2_22640 Lactuca sativa
Manes.08G022501 Manihot esculenta
Manes.08G022601 Manihot esculenta
Mapoly0100s0026 Marchantia polymorpha
MBI01_g08270_MAGBIO Magnolia biondii
MCO16G241 Micromonas commoda
MD04G1094600 Malus domestica
MD12G1020700 Malus domestica
MD14G1017800 Malus domestica
MD14G1018000 Malus domestica
Medtr1g060850 Medicago truncatula
Medtr1g060860 Medicago truncatula
MELO3C009446.2 Cucumis melo
MELO3C009819.2 Cucumis melo
Migut.J00973 Erythranthe guttata
MSTRG.19241 Avicennia marina
Nitab4.5_0004686g0040 Nicotiana tabacum
Nitab4.5_0004686g0050 Nicotiana tabacum
Nitab4.5_0008581g0020 Nicotiana tabacum
Nitab4.5_0009950g0030 Nicotiana tabacum
Nn6g35006 Nelumbo nucifera
Nn6g35008 Nelumbo nucifera
Nn6g35009 Nelumbo nucifera
Oeu018347.1 Olea europaea
Os04g0409500 Oryza sativa ssp. japonica
Peaxi162Scf00820g00056 Petunia axillaris
PGR004G0044 Punica granatum
PGSC0003DMG400002713 Solanum tuberosum
Phvul.007G222200 Phaseolus vulgaris
Potri.002G156200 Populus trichocarpa
Potri.002G156500 Populus trichocarpa
Pp3c12_22780 Physcomitrium patens
Pp3c4_390 Physcomitrium patens
Prupe.3G199100 Prunus persica
Prupe.7G115300 Prunus persica
Psat6g080360 Pisum sativum
PSO339G4586 Papaver somniferum
PSO384G1693 Papaver somniferum
QL07p039953 Quercus lobata
RcHm_v2.0_Chr3g0472431 Rosa chinensis
RcHm_v2.0_Chr3g0472441 Rosa chinensis
Rhsim03G0078800 Rhododendron simsii
Sabra02G0123600 Salix brachista
Sabra02G0124100 Salix brachista
Sabra14G0058200 Salix brachista
SalBow3G2853 Salvia bowleyana
Sc02g0001070 Simmondsia chinensis
Sed0002679 Sechium edule
Sed0010579 Sechium edule
SEGI_28091 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06769 Striga asiatica
SMO352G0026 Selaginella moellendorffii
Solyc09g009170.4 Solanum lycopersicum
Sopen09g003900 Solanum pennellii
Sp3g08310 Schrenkiella parvula
TAR369G0658 Trochodendron aralioides
TAR623G0504 Trochodendron aralioides
TAR628G0764 Trochodendron aralioides
THA.LOC104816365 Tarenaya hassleriana
Thecc.05G083800 Theobroma cacao
Thecc.05G084100 Theobroma cacao
Thhalv10021191m.g Eutrema salsugineum
TPR.G5702 Trifolium pratense
TWI74G0549 Tripterygium wilfordii
vmacro07384 Vaccinium macrocarpon
VMungo0720G1002 Vigna mungo
VMungo0720G2061 Vigna mungo
Zm00001eb198060 Zea mays
Zm00001eb312570 Zea mays
Zm00001eb421860 Zea mays

User provided reference genes

Program Settings