Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p02250 Brassica napus
A07p04510 Brassica napus
A07p25650 Brassica napus
A08p00070 Brassica napus
Aa31LG8G13770 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1521 Anthoceros agrestis
Actinidia02234 Actinidia chinensis
Ah.01g019050 Amaranthus hybridus
AL3G52590 Arabidopsis lyrata
Aqoxy6G01233 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6QR9E7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PP2YAD Arachis hypogaea
AT2G16405 Arabidopsis thaliana
ATR0665G578 Amborella trichopoda
Atru.chr5.3102 Acer truncatum
AUR62010439 Chenopodium quinoa
AUR62016783 Chenopodium quinoa
BcaB03g16352 Brassica carinata
BcaC06g35114 Brassica carinata
BcaC06g35115 Brassica carinata
BcaC06g36149 Brassica carinata
BolC7t41142H Brassica oleracea
BolC7t42483H Brassica oleracea
BraA07t28242Z Brassica rapa
BraA08t32064Z Brassica rapa
C07p07220 Brassica napus
C07p19660 Brassica napus
CANSAT11G2456 Cannabis sativa
CARHR106660 Cardamine hirsuta
Carub.0003s3018 Capsella rubella
Ca_23899_v3 Cicer arietinum L.
CBR_g20107 Chara braunii
CBR_g9222 Chara braunii
Cc02_g17150 Coffea canephora
CDE06G1738 Ceratophyllum demersum
CDE06G2285 Ceratophyllum demersum
Ciclev10028263m.g Citrus clementina
CiPaw.05G070800 Carya illinoinensis
CiPaw.06G131700 Carya illinoinensis
ClCG11G004080 Citrullus lanatus
COL.COLO4_26004 Corchorus olitorius
Cpa.g.sc150.55 Carica papaya
Cre06.g278205 Chlamydomonas reinhardtii
CsaV3_2G015120 Cucumis sativus L.
CSS0007587 Camellia sinensis var. sinensis
CSS0009403 Camellia sinensis var. sinensis
CSS0014539 Camellia sinensis var. sinensis
CSS0016397 Camellia sinensis var. sinensis
CSS0018321 Camellia sinensis var. sinensis
CSS0018700 Camellia sinensis var. sinensis
CSS0020327 Camellia sinensis var. sinensis
CSS0022719 Camellia sinensis var. sinensis
CSS0037916 Camellia sinensis var. sinensis
CSS0039319 Camellia sinensis var. sinensis
CSS0043881 Camellia sinensis var. sinensis
CSS0046659 Camellia sinensis var. sinensis
CSS0048156 Camellia sinensis var. sinensis
DCAR_004295 Daucus carota
Dinv42028 Davidia involucrata
Duzib132G0651 Durio zibethinus
ECA236G1753 Erigeron canadensis
EL10Ac9g21684 Beta vulgaris
Eucgr.G01705 Eucalyptus grandis
FAN15G1732 Fragaria x ananassa
FAN20G0404 Fragaria x ananassa
FAN24G2910 Fragaria x ananassa
FvH4_2g09910 Fragaria vesca
Glyma.12G236400 Glycine max
Glyma.13G201900 Glycine max
Gohir.A01G004000 Gossypium hirsutum
Gohir.A04G124200 Gossypium hirsutum
Gohir.D01G004000 Gossypium hirsutum
Gohir.D04G166300 Gossypium hirsutum
Gorai.002G004900 Gossypium raimondii
Gorai.012G154700 Gossypium raimondii
GSVIVG01024219001 Vitis vinifera
HanXRQChr04g0127771 Helianthus annuus
Haze_02317 Corylus avellana
Hma1.2p1_0066F.1_g036020 Hydrangea macrophylla
Hma1.2p1_0066F.1_g036030 Hydrangea macrophylla
HPP92_010166 Vanilla planifolia
HPP92_010172 Vanilla planifolia
HPP92_010256 Vanilla planifolia
HPP92_010449 Vanilla planifolia
Hund06247 Selenicereus undatus
Lalb_Chr03g0034131 Lupinus albus
Lj3g0010610 Lotus japonicus
Lj5C193G6 Lonicera japonica
Lsat_1_v5_gn_7_91761 Lactuca sativa
Lsat_1_v5_gn_9_107760 Lactuca sativa
Manes.12G155700 Manihot esculenta
Mapoly0099s0024 Marchantia polymorpha
MBI01_g12681_MAGBIO Magnolia biondii
MBI03_g43429_MAGBIO Magnolia biondii
MD05G1059400 Malus domestica
MD10G1067500 Malus domestica
Medtr8g037340 Medicago truncatula
MELO3C023337.2 Cucumis melo
Migut.B00202 Erythranthe guttata
MSTRG.16832 Avicennia marina
Nitab4.5_0005919g0020 Nicotiana tabacum
Nitab4.5_0009512g0060 Nicotiana tabacum
Nn5g29154 Nelumbo nucifera
Oeu004806.3 Olea europaea
Oeu041611.2 Olea europaea
Os01g0776400 Oryza sativa ssp. japonica
Peaxi162Scf00016g00336 Petunia axillaris
Peaxi162Scf00016g00337 Petunia axillaris
PGR042G2402 Punica granatum
PGSC0003DMG400030963 Solanum tuberosum
Phvul.011G210700 Phaseolus vulgaris
Potri.004G160000 Populus trichocarpa
Potri.009G121100 Populus trichocarpa
Pp3c21_5350 Physcomitrium patens
PRCOL_00003847 Prasinoderma coloniale
Prupe.8G089300 Prunus persica
Psat4g148720 Pisum sativum
PSO541G2662 Papaver somniferum
PSO675G3543 Papaver somniferum
QL11p045411 Quercus lobata
RcHm_v2.0_Chr6g0266641 Rosa chinensis
RcHm_v2.0_Chr6g0266811 Rosa chinensis
Rhsim05G0070500 Rhododendron simsii
Sabra04G0107000 Salix brachista
SalBow6G1040 Salvia bowleyana
SalBow6G4139 Salvia bowleyana
Sc08g0000700 Simmondsia chinensis
Sed0016950 Sechium edule
SEGI_12567 Sequoiadendron giganteum
SEGI_20344 Sequoiadendron giganteum
SGA_v2.0_scaffold58G20494 Striga asiatica
SMO232G0022 Selaginella moellendorffii
Solyc01g110030.3 Solanum lycopersicum
Sopen01g052220 Solanum pennellii
Sp3g29690 Schrenkiella parvula
TAR381G0064 Trochodendron aralioides
TAR381G0878 Trochodendron aralioides
TAR625G0679 Trochodendron aralioides
THA.LOC104807298 Tarenaya hassleriana
Thecc.02G079100 Theobroma cacao
Thhalv10022667m.g Eutrema salsugineum
TPR.G1894 Trifolium pratense
TWI79G0003 Tripterygium wilfordii
unitig_21.g20796 Utricularia gibba
vmacro17453 Vaccinium macrocarpon
VMungo1127G0930 Vigna mungo
Zm00001eb151660 Zea mays

User provided reference genes

Program Settings