Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p17510 Brassica napus
A08p28940 Brassica napus
Aa31LG7G5420 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5615 Anthoceros agrestis
Actinidia15165 Actinidia chinensis
Actinidia16590 Actinidia chinensis
Actinidia30526 Actinidia chinensis
Ah.05g167500 Amaranthus hybridus
AL1G34590 Arabidopsis lyrata
Aqoxy6G00340 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1CL4KB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AQ25H9 Arachis hypogaea
AT1G21480 Arabidopsis thaliana
ATR1136G054 Amborella trichopoda
Atru.chr13.1691 Acer truncatum
AUR62027615 Chenopodium quinoa
AUR62030231 Chenopodium quinoa
BcaB07g32137 Brassica carinata
BcaC05g26055 Brassica carinata
BcaC07g39103 Brassica carinata
BolC5t30730H Brassica oleracea
BolC8t49724H Brassica oleracea
BraA06t24847Z Brassica rapa
BraA08t34827Z Brassica rapa
C05p20340 Brassica napus
C08p20850 Brassica napus
CAN.G2.46 Capsicum annuum
CANSAT80G0700 Cannabis sativa
CARHR021850 Cardamine hirsuta
Carub.0001s2088 Capsella rubella
Ca_12658_v3 Cicer arietinum L.
Cc10_g12980 Coffea canephora
CDE02G2042 Ceratophyllum demersum
CDE08G0515 Ceratophyllum demersum
CDE08G0561 Ceratophyllum demersum
CDE08G1021 Ceratophyllum demersum
CDE08G1464 Ceratophyllum demersum
Cfa018373 Carpinus fangiana
Ciclev10001104m.g Citrus clementina
CiPaw.15G022200 Carya illinoinensis
CiPaw.16G018300 Carya illinoinensis
ClCG08G006410 Citrullus lanatus
COL.COLO4_09224 Corchorus olitorius
COL.COLO4_26591 Corchorus olitorius
COL.COLO4_33183 Corchorus olitorius
COL.COLO4_33184 Corchorus olitorius
Cpa.g.sc49.73 Carica papaya
CsaV3_6G031010 Cucumis sativus L.
CSS0007222 Camellia sinensis var. sinensis
CSS0017168 Camellia sinensis var. sinensis
DCAR_001547 Daucus carota
Dinv41130 Davidia involucrata
Duzib041G0632 Durio zibethinus
Duzib093G1227 Durio zibethinus
Duzib116G0169 Durio zibethinus
EL10As10g23958 Beta vulgaris
Eucgr.E02380 Eucalyptus grandis
FAN15G0455 Fragaria x ananassa
FAN20G2551 Fragaria x ananassa
FvH4_2g14790 Fragaria vesca
Glyma.14G120700 Glycine max
Glyma.14G202400 Glycine max
Glyma.14G202500 Glycine max
Gohir.A02G067100 Gossypium hirsutum
Gohir.D02G073300 Gossypium hirsutum
Gorai.005G082700 Gossypium raimondii
GSVIVG01010019001 Vitis vinifera
HanXRQChr05g0160791 Helianthus annuus
Hma1.2p1_0107F.1_g051390 Hydrangea macrophylla
HPP92_013480 Vanilla planifolia
Hund26734 Selenicereus undatus
Lalb_Chr20g0118701 Lupinus albus
Lj1g0013822 Lotus japonicus
Lj2g0027047 Lotus japonicus
Lj4A690G48 Lonicera japonica
Lsat_1_v5_gn_6_96840 Lactuca sativa
Manes.02G174400 Manihot esculenta
Manes.14G172101 Manihot esculenta
Manes.18G086500 Manihot esculenta
Manes.18G141804 Manihot esculenta
MBI06_g35967_MAGBIO Magnolia biondii
MBI06_g41412_MAGBIO Magnolia biondii
MBI06_g43016_MAGBIO Magnolia biondii
MBI06_g46897_MAGBIO Magnolia biondii
MD05G1012600 Malus domestica
MD10G1012500 Malus domestica
Medtr1g029350 Medicago truncatula
MELO3C008415.2 Cucumis melo
Migut.C01051 Erythranthe guttata
MSTRG.1377 Avicennia marina
MSTRG.25335 Avicennia marina
Nitab4.5_0000445g0110 Nicotiana tabacum
Nitab4.5_0004095g0020 Nicotiana tabacum
Nn1g06227 Nelumbo nucifera
Nn5g28611 Nelumbo nucifera
Nn5g28612 Nelumbo nucifera
Nn8g40988 Nelumbo nucifera
Oeu025719.1 Olea europaea
Oeu046001.1 Olea europaea
Peaxi162Scf00263g00031 Petunia axillaris
Peaxi162Scf00263g00036 Petunia axillaris
PGR044G0933 Punica granatum
PGSC0003DMG400024814 Solanum tuberosum
Phvul.001G063800 Phaseolus vulgaris
Potri.002G072300 Populus trichocarpa
Potri.005G187400 Populus trichocarpa
Pp3c14_16130 Physcomitrium patens
Prupe.8G017900 Prunus persica
Psat6g040360 Pisum sativum
PSO541G4886 Papaver somniferum
PSO675G1430 Papaver somniferum
PSO675G5177 Papaver somniferum
PSO675G6807 Papaver somniferum
QL02p025654 Quercus lobata
RcHm_v2.0_Chr1g0331511 Rosa chinensis
RcHm_v2.0_Chr6g0277351 Rosa chinensis
Rhsim11G0077300 Rhododendron simsii
Sabra02G0056900 Salix brachista
Sabra05G0143000 Salix brachista
SalBow7G2754 Salvia bowleyana
Sc20g0003350 Simmondsia chinensis
Sed0007666 Sechium edule
Sed0020214 Sechium edule
SEGI_18713 Sequoiadendron giganteum
SEGI_35480 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10385 Striga asiatica
SGA_v2.0_scaffold48G17939 Striga asiatica
SHI09476 Sapria himalayana
SHI09486 Sapria himalayana
SMO174G0205 Selaginella moellendorffii
Solyc04g064680.4 Solanum lycopersicum
Sopen04g026640 Solanum pennellii
Sp1g19010 Schrenkiella parvula
TAR381G1299 Trochodendron aralioides
TAR625G0035 Trochodendron aralioides
THA.LOC104810043 Tarenaya hassleriana
THA.LOC104812071 Tarenaya hassleriana
Thecc.08G143300 Theobroma cacao
Thecc.08G143500 Theobroma cacao
Thhalv10007584m.g Eutrema salsugineum
TPR.G33329 Trifolium pratense
TWI74G0391 Tripterygium wilfordii
unitig_82.g27089 Utricularia gibba
vmacro00876 Vaccinium macrocarpon
vmacro00889 Vaccinium macrocarpon
VMungo0647G0181 Vigna mungo
Zm00001eb147610 Zea mays

User provided reference genes

Program Settings